RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Ncoa3O09000 1398 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Ppip5k1A2ARP1 1436 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 TxlnaQ6PAM1 554 aaKnown RBP20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Ddx10Q80Y44 875 aaKnown RBP20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Bag4Q8CI61 457 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Frat2Q8K025 231 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Jakmip2D3YXK0 820 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Rapgef3Q8VCC8 918 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Stx6Q9JKK1 255 aa20.78■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 GckrQ91X44 587 aa20.77■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Usp5P56399 858 aaKnown RBP20.77■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Jade2Q6ZQF7 829 aa20.77■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Taf7Q9R1C0 341 aa20.77■□□□□ 0.92
Smarcc1-207ENSMUST00000199896 Sdc2P43407 202 aa20.77■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ptcd1Q8C2E4 695 aaKnown RBP20.77■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Cetn2Q9R1K9 172 aa20.77■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Gbp4Q61107 620 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Serpina10Q8R121 448 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ppm1eQ80TL0 749 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Def6Q8C2K1 630 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Tmod2Q9JKK7 351 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Rbbp8nlA2ABX0 614 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Uspl1Q3ULM6 1089 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Otud6bQ8K2H2 294 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 MicalclQ9D5U9 680 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ppfia1B2RXQ2 1266 aa20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Mrpl44Q9CY73 333 aaKnown RBP20.76■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Slc1a4O35874 532 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Rnf187Q8BFX1 236 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 PaskQ8CEE6 1383 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Anapc15-psA0A140T8L6 141 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Tmem266Q8BZB3 538 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Smtnl1Q99LM3 459 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Atp2b3Q0VF55 1220 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Glg1Q61543 1175 aaKnown RBP20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Tmem143Q8VD26 458 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Dydc1Q9D9T0 175 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 DroshaQ5HZJ0 1373 aaKnown RBP20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ampd3O08739 766 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Epb41l3Q9WV92 929 aa20.75■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Pik3c2gO70167 1506 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Naip5Q9R016 1403 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Thoc2B1AZI6 1594 aaKnown RBP20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Tceanc2Q8R2M0 207 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Lman1Q9D0F3 517 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 ImpactO55091 318 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Slx4Q6P1D7 1565 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Eif4a2P10630 407 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Kmt5bQ3U8K7 883 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Hmg20bQ9Z104 317 aa20.74■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Phlpp2Q8BXA7 1320 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Nap1l2P51860 460 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Vps16Q920Q4 839 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 SrrtQ99MR6 875 aaKnown RBP20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 FanclQ9CR14 375 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Zscan29E9Q5B4 869 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Stat1P42225 749 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Grm8P47743 908 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ddb1Q3U1J4 1140 aaKnown RBP20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Fam160b2Q80YR2 744 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Letm1Q9Z2I0 738 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Cers3Q1A3B0 383 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Cnga2Q62398 664 aa20.73■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 DlatQ8BMF4 642 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Cetn1P41209 172 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Paxip1Q6NZQ4 1056 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Trappc8E9PWG2 1437 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Myo1bP46735 1107 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 WtapQ9ER69 396 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Slc4a4O88343 1079 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Bloc1s2Q9CWG9 143 aa20.72■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Ankrd26Q811D2 1581 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Lmod1Q8BVA4 595 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Emilin2Q8K482 1074 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Cnot6lQ8VEG6 555 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Rasa1E9PYG6 1038 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Amotl1Q9D4H4 968 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Klhl10Q9D5V2 608 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 DymQ8CHY3 669 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Dydc2Q9D3X8 139 aa20.71■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Jdp2P97875 163 aa20.7■□□□□ 0.91
Smarcc1-207ENSMUST00000199896 Dnm1P39053 867 aa20.7■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Baiap2l1Q9DBJ3 514 aa20.7■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Asxl2Q8BZ32 1370 aa20.7■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Pa2g4P50580 394 aaKnown RBP20.7■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 2310002L09RikQ9D7L5 217 aa20.7■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Spag5Q7TME2 1165 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Rcan3Q9JKK0 239 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Ctnnbl1Q9CWL8 563 aaKnown RBP20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 MthfsQ9D110 203 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Zbtb43Q9DAI4 467 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Igbp1bQ9QZ29 343 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 U2af1l4Q8BGJ9 220 aa20.69■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Mcm4P49717 862 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Plekhg2Q6KAU7 1340 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Ttc12Q8BW49 704 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Krt23Q99PS0 422 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Fam213aQ9CYH2 218 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Cyp2ab1S4R196 498 aa20.68■□□□□ 0.9
Smarcc1-207ENSMUST00000199896 Gjc1P28229 396 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms