RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Vsig10D3YX43 558 aa13.12□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Cct4P80315 539 aaKnown RBP13.11□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ttc19Q8CC21 365 aa13.11□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Col4a1P02463 1669 aa13.11□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ybx3Q9JKB3 361 aaKnown RBP13.11□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Plcb2A3KGF7 1181 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Bcl9lQ67FY2 1494 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Htatsf1Q8BGC0 757 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Fam84aQ9D650 292 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ripor2Q80U16 1078 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 EngaseQ8BX80 734 aa13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Nip7Q9CXK8 180 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Zkscan16A2ALW2 728 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Tom1O88746 492 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Myd88P22366 296 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Mum1Q6DID5 682 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Mlh1Q9JK91 760 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Abcc4E9Q236 1325 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ubap1lG3UW59 384 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Zbtb40Q6PCS8 1258 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Abca15E9PWH4 1668 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ddx58Q6Q899 926 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Q8BT18 775 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Rrs1Q9CYH6 365 aaKnown RBP13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Ltb4r2Q9JJL9 360 aa13.09□□□□□ -0.31
Pcdh20-202ENSMUST00000192557 Exoc5Q3TPX4 708 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Nlrp9bQ66X22 1003 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 DekQ7TNV0 380 aaKnown RBP13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Slfnl1Q8BHW9 410 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ccdc129Q14B48 1034 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Nol8Q3UHX0 1147 aaKnown RBP13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Fam228bQ497Q6 232 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Sik1Q60670 779 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 1700010I14RikQ7TPG0 532 aa13.08□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Strn4P58404 760 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 VgfQ0VGU4 617 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Hdac6Q9Z2V5 1149 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Sf3b2Q3UJB0 878 aaKnown RBP13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Stard3nlQ9DCI3 235 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Gm12185Q5NCB2 835 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Trim52Q8CDV4 233 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Zeb2Q9R0G7 1215 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Pmfbp1Q9WVQ0 1022 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 InsrrQ9WTL4 1300 aa13.07□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Gnat3Q3V3I2 354 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Dcaf5Q80T85 946 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Bsdc1Q80Y55 427 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Dis3l2Q8CI75 870 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Bag3Q9JLV1 577 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 F2rP30558 430 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 GptQ8QZR5 496 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Taf5lQ91WQ5 589 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Lrrc59Q922Q8 307 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Cwc25Q9DBF7 416 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Tnks1bp1P58871 1720 aa13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ccdc9Q8VC31 543 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 FocadA2AKG8 1798 aa13.05□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 MccE9PWI3 1003 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Hspa1lP16627 641 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Zbtb1Q91VL9 713 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Cyp27a1Q9DBG1 533 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Timm10P62073 90 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Vps54Q5SPW0 977 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Anxa1P10107 346 aaKnown RBP13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 DbnlQ62418 436 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Miga2Q8BK03 593 aa13.04□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Crb1Q8VHS2 1405 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Casq1O09165 405 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Rsph3aQ3UFY4 516 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Sf3a1Q8K4Z5 791 aaKnown RBP13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 EvcP57680 1005 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ltv1Q6NSQ7 470 aaKnown RBP13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ssh1Q76I79 1042 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Gdpd2Q9ESM6 539 aa13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ddb1Q3U1J4 1140 aaKnown RBP13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Ddx46Q569Z5 1032 aaKnown RBP13.03□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Mst1rQ62190 1378 aa13.02□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 BcorQ8CGN4 1759 aa13.02□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Top1mtQ8R4U6 593 aa13.02□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Slx4ipQ9D7Y9 413 aa13.02□□□□□ -0.32
Pcdh20-202ENSMUST00000192557 Akap11E9Q777 1895 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Kcnh4A2A5F7 1018 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 MecomP14404 1042 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Morc2aQ69ZX6 1030 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Ankrd23Q812A3 306 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Tceanc2Q8R2M0 207 aa13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Kiaa0232Q80U59 1396 aaKnown RBP13.02□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Bicdl1A0JNT9 577 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 AK157302I3ITR1 129 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Mdm2P23804 489 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Nol12Q8BG17 217 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Sgsm1Q8BPQ7 1093 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Slc5a4bQ91ZP4 660 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Antxr1Q9CZ52 562 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Isca1Q9D924 129 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Jmjd4Q8BFT6 427 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Tmem87bQ8BKU8 555 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Kdm4cQ8VCD7 1054 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Sult6b1P0CC03 303 aa13.01□□□□□ -0.33
Pcdh20-202ENSMUST00000192557 Irx3P81067 507 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms