RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Ankrd23Q812A3 306 aa13.25□□□□□ -0.29
Lig3-210ENSMUST00000173347 Jmjd4Q8BFT6 427 aa13.24□□□□□ -0.29
Lig3-210ENSMUST00000173347 Pde4dQ01063 747 aa13.24□□□□□ -0.29
Lig3-210ENSMUST00000173347 Ccdc129Q14B48 1034 aa13.24□□□□□ -0.29
Lig3-210ENSMUST00000173347 Pde3bQ61409 1100 aa13.24□□□□□ -0.29
Lig3-210ENSMUST00000173347 Nlrp9bQ66X22 1003 aa13.24□□□□□ -0.29
Lig3-210ENSMUST00000173347 InsrrQ9WTL4 1300 aa13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 Hspa1lP16627 641 aa13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 1700010I14RikQ7TPG0 532 aa13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 Tmem87bQ8BKU8 555 aa13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 Cwc25Q9DBF7 416 aa13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 Kiaa0232Q80U59 1396 aaKnown RBP13.23□□□□□ -0.29
Lig3-210ENSMUST00000173347 Ddb1Q3U1J4 1140 aaKnown RBP13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 Dcaf5Q80T85 946 aa13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 Smc4Q8CG47 1286 aa13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 Myd88P22366 296 aa13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 Sf3b2Q3UJB0 878 aaKnown RBP13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 Kat6bQ8BRB7 1872 aa13.22□□□□□ -0.29
Lig3-210ENSMUST00000173347 CalcaP70160 136 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Q8C5K5 320 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Psrc1Q9D0P7 329 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Clcn1Q64347 994 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Amer1Q7TS75 1132 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Prune1Q8BIW1 454 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Nav1Q8CH77 1875 aa13.21□□□□□ -0.29
Lig3-210ENSMUST00000173347 Ankib1Q6ZPS6 1085 aa13.21□□□□□ -0.3
Lig3-210ENSMUST00000173347 Htatsf1Q8BGC0 757 aa13.21□□□□□ -0.3
Lig3-210ENSMUST00000173347 Adora1Q60612 326 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 NexnQ7TPW1 607 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Shank3Q4ACU6 1730 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 MccE9PWI3 1003 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Terf2O35144 541 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Vps33bP59016 617 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Gigyf1Q99MR1 1044 aaKnown RBP13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Nip7Q9CXK8 180 aaKnown RBP13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 AK157302I3ITR1 129 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 AbraQ8BUZ1 375 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Sf3a1Q8K4Z5 791 aaKnown RBP13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Isca1Q9D924 129 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ehd4Q9EQP2 541 aa13.2□□□□□ -0.3
Lig3-210ENSMUST00000173347 Lrp6O88572 1613 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Fam213aQ9CYH2 218 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 AppP12023 770 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Unc5clQ6R653 518 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Brf1Q8CFK2 676 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Slc26a8Q8R0C3 999 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Stk3Q9JI10 497 aa13.19□□□□□ -0.3
Lig3-210ENSMUST00000173347 Col4a1P02463 1669 aa13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ets1P27577 440 aa13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Edc3Q8K2D3 508 aaKnown RBP13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ltb4r2Q9JJL9 360 aa13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Bag3Q9JLV1 577 aaKnown RBP13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Nol8Q3UHX0 1147 aaKnown RBP13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Brpf1B2RRD7 1212 aa13.18□□□□□ -0.3
Lig3-210ENSMUST00000173347 Sos2Q02384 1333 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Catsper2A2ARP9 588 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Kdm4cQ8VCD7 1054 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Rnf123Q5XPI3 1314 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Taf5lQ91WQ5 589 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Rfx1P48377 963 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Jarid2Q62315 1234 aa13.17□□□□□ -0.3
Lig3-210ENSMUST00000173347 Nwd2Q6P5U7 1742 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 MetP16056 1379 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Fer1l6E0CZ42 1862 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Mrc1Q61830 1456 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Prl3d3A0A0M6L0J6 224 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Neurod6P48986 337 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Fam228bQ497Q6 232 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Nol10Q5RJG1 687 aaKnown RBP13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ttc19Q8CC21 365 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Emilin2Q8K482 1074 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Nlrp3Q8R4B8 1033 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ank1Q02357 1862 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Mrps27Q8BK72 415 aaKnown RBP13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 EngaseQ8BX80 734 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Chmp3Q9CQ10 224 aa13.16□□□□□ -0.3
Lig3-210ENSMUST00000173347 Ppp4r3aQ6P2K6 820 aa13.15□□□□□ -0.3
Lig3-210ENSMUST00000173347 Klc3Q91W40 508 aa13.15□□□□□ -0.3
Lig3-210ENSMUST00000173347 Prl3d2F6R3P9 224 aa13.15□□□□□ -0.3
Lig3-210ENSMUST00000173347 Rbm27Q5SFM8 1060 aaKnown RBP13.15□□□□□ -0.3
Lig3-210ENSMUST00000173347 Rhot2Q8JZN7 620 aa13.15□□□□□ -0.3
Lig3-210ENSMUST00000173347 Zbtb1Q91VL9 713 aa13.14□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rapgef4Q9EQZ6 1011 aa13.14□□□□□ -0.31
Lig3-210ENSMUST00000173347 Mast2Q60592 1734 aa13.14□□□□□ -0.31
Lig3-210ENSMUST00000173347 Cacna1sQ02789 1880 aa13.14□□□□□ -0.31
Lig3-210ENSMUST00000173347 Tbc1d4Q8BYJ6 1307 aa13.14□□□□□ -0.31
Lig3-210ENSMUST00000173347 Sult6b1P0CC03 303 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Anapc15P60007 132 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Zkscan16A2ALW2 728 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Nlrp1aQ2LKU9 1182 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Eno4Q8C042 619 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rsph3aQ3UFY4 516 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Dhx38Q80X98 1228 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 4930504O13RikQ8C5Z9 145 aa13.13□□□□□ -0.31
Lig3-210ENSMUST00000173347 Ppfia1B2RXQ2 1266 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 EspnlQ3UYR4 1005 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Adam1aQ60813 791 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Jakmip1Q8BVL9 626 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Dis3l2Q8CI75 870 aaKnown RBP13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Stk11ipQ3TAA7 1072 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms