RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Rbm42Q91V81 474 aaKnown RBP20.79■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Ptpn23Q6PB44 1692 aa20.79■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Nphp3Q7TNH6 1325 aa20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Cnnm3Q32NY4 713 aa20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Gsdma3Q5Y4Y6 464 aa20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Taf5lQ91WQ5 589 aa20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 EzrP26040 586 aaKnown RBP20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Grpel1Q99LP6 217 aa20.78■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Brpf3B2KF05 1204 aaKnown RBP20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Echdc1Q9D9V3 322 aa20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Il1rapl2Q9ERS6 686 aa20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Usp25P57080 1055 aa20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Cchcr1Q8K2I2 770 aa20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Chrna2Q91X60 512 aa20.77■□□□□ 0.92
Ckap4-202ENSMUST00000167671 Rbm8a2A0A0N4SUH6 174 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Kif3aP28741 701 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Map3k2Q61083 619 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Inpp5bQ8K337 993 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 SrrtQ99MR6 875 aaKnown RBP20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Rbm8aQ9CWZ3 174 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Spata31d1bE9QA57 1361 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 CebpzP53569 1052 aaKnown RBP20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Ddx11Q6AXC6 880 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Kcnf1Q7TSH7 493 aa20.76■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Lmod3E9QA62 571 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Btbd11Q6GQW0 1109 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Nap1l3Q794H2 544 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Safb2Q80YR5 991 aaKnown RBP20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Ak2Q9WTP6 239 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 PtprvP70289 1705 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Lekr1B2RVN1 116 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Fam13bQ8K2H3 851 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Zbtb3Q91X45 518 aa20.75■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Adcy9P51830 1353 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Ets1P27577 440 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Sgsm2Q80U12 1005 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Polr3dQ91WD1 398 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 NaspQ99MD9 773 aaKnown RBP20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Ndufa8Q9DCJ5 172 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Arfgef2A2A5R2 1792 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Nkx2-3P97334 362 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Dnajc5gQ8C632 165 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Igbp1bQ9QZ29 343 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Hoxa7P02830 229 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 PdcQ9QW08 244 aa20.74■□□□□ 0.91
Ckap4-202ENSMUST00000167671 MecomP14404 1042 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Jarid2Q62315 1234 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Zfp91Q62511 572 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Atg3Q9CPX6 314 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Add3Q9QYB5 706 aaKnown RBP20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Scn7aB1AYL1 1681 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Evi5lH3BKQ3 813 aa20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Esyt1Q3U7R1 1092 aaKnown RBP20.73■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Zkscan7E9PVW1 718 aa20.72■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Nfe2l3Q9WTM4 660 aa20.72■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Ugt1a5B2RT14 529 aa20.72■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Fbxo2Q80UW2 297 aa20.72■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Chd2E9PZM4 1827 aaKnown RBP20.71■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Slc26a8Q8R0C3 999 aa20.71■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Amotl1Q9D4H4 968 aa20.71■□□□□ 0.91
Ckap4-202ENSMUST00000167671 Dlg5E9Q9R9 1921 aa20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Cbx1P83917 185 aaKnown RBP20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Leo1Q5XJE5 667 aa20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Oxsr1Q6P9R2 527 aa20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Ccdc94Q9D6J3 314 aa20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Abcc4E9Q236 1325 aa20.7■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Trim30aP15533 496 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Mdm2P23804 489 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 4930504O13RikQ8C5Z9 145 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Bicc1Q99MQ1 977 aaKnown RBP20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Kcnb2A6H8H5 907 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Tpd52l1O54818 204 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 TatQ8QZR1 454 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Dhx30Q99PU8 1217 aaKnown RBP20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Tbc1d8Q9Z1A9 1134 aa20.69■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Wdr33Q8K4P0 1330 aaKnown RBP20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Eef2kO08796 724 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Tyro3P55144 880 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Nucb2P81117 420 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Ccdc162pQ0VG85 912 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Zfp113Q8C689 439 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Tmem94Q7TSH8 1360 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Nxf2Q4ZGD8 691 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 TnmdQ9EP64 317 aa20.68■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Dmrt2Q8BG36 561 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Fmnl2A2APV2 1086 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 1700006A11RikB9EHI3 544 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Mctp1E9PV86 951 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 FosbP13346 338 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Kank4Q6P9J5 1016 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Nrbp1Q99J45 535 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Bloc1s2Q9CWG9 143 aa20.67■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Cspp1B2RX88 1205 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Tnnt2P50752 301 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Ccdc155Q80VJ8 648 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Me3Q8BMF3 604 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Bag3Q9JLV1 577 aaKnown RBP20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Lnx1O70263 728 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 FanccP50652 591 aa20.66■□□□□ 0.9
Ckap4-202ENSMUST00000167671 Col1a2Q01149 1372 aa20.65■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms