RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 Anp32cQ64G17 123 aa10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Luzp1Q8R4U7 1068 aaKnown RBP10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Atp6v1aP50516 617 aaKnown RBP10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Igflr1Q3U4N7 345 aa10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Klc3Q91W40 508 aa10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Stxbp4Q9WV89 557 aa10.69□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Slc5a1Q8C3K6 665 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Spty2d1Q68FG3 682 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Gimap5Q8BWF2 308 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Skor1Q8BX46 964 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Atf7ipQ7TT18 1306 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Specc1lQ2KN98 1118 aaKnown RBP10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Slc8a1P70414 970 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Znf692Q3U381 531 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Capn2O08529 700 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Arfgap2Q99K28 520 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 IbtkQ6ZPR6 1352 aaKnown RBP10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Lamc3Q9R0B6 1581 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rasa1E9PYG6 1038 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rassf2Q8BMS9 326 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Kdm5aQ3UXZ9 1690 aa10.68□□□□□ -0.7
Ttc28-206ENSMUST00000156290 IqcgQ80W32 419 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Farp2Q91VS8 1065 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Atp8b3Q6UQ17 1335 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Nap1l2P51860 460 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Letm1Q9Z2I0 738 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ehmt1Q5DW34 1296 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ccdc38Q8CDN8 563 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cyp26c1B2RXA7 518 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Usp25P57080 1055 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Tango6Q8C3S2 1079 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Zeb2Q9R0G7 1215 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ncapg2Q6DFV1 1138 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rufy2Q8R4C2 606 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ubn2Q80WC1 1314 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rimbp2Q80U40 1072 aa10.67□□□□□ -0.7
Ttc28-206ENSMUST00000156290 GpkowQ56A08 488 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Prpf4bQ61136 1007 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Prm3Q62100 101 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Mrps27Q8BK72 415 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Dzip1Q8BMD2 852 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Trim11Q99PQ2 467 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Armc9Q9D2I5 817 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Gbp2Q9Z0E6 589 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rrbp1Q99PL5 1605 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Irx1P81068 480 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Fam170aQ66LM6 333 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Igf1rQ60751 1373 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cdr1E9Q0B4 517 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Gzf1Q4VBD9 706 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Larp1Q6ZQ58 1072 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 LlphQ9D945 130 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Jade2Q6ZQF7 829 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Aldh1l1Q8R0Y6 902 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ebag9Q9D0V7 213 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Nkx1-2P42580 305 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Kif5bQ61768 963 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Mtmr3Q8K296 1196 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Nlrp3Q8R4B8 1033 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Eif3bQ8JZQ9 803 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Slc52a2Q9D8F3 450 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Tfip11Q9ERA6 838 aaKnown RBP10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cfap73J3QPZ5 306 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cep131Q62036 1060 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Slc13a4Q8BZ82 625 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ppp4r3bQ922R5 820 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Stx6Q9JKK1 255 aa10.66□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Top1Q04750 767 aaKnown RBP10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Luc7l3Q5SUF2 432 aaKnown RBP10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cfap69Q8BH53 942 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Suds3Q8BR65 328 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Ccdc42Q5SV66 316 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Rbbp5Q8BX09 538 aaKnown RBP10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Odf2lQ9D478 642 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Trak2Q6P9N8 913 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Tbc1d7Q9D0K0 293 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Polr3aB2RXC6 1390 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Tnni2P13412 182 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Arhgef6Q8K4I3 771 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 GptQ8QZR5 496 aa10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Nsfl1cQ9CZ44 370 aaKnown RBP10.65□□□□□ -0.7
Ttc28-206ENSMUST00000156290 Cpa2Q504N0 417 aa10.65□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Ncoa3O09000 1398 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Ptpdc1Q6NZK8 747 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Smarcc2Q6PDG5 1213 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Chd1lQ9CXF7 900 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Mapkbp1Q6NS57 1503 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Chpf2Q3UU43 768 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Brf1Q8CFK2 676 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Mipol1Q9D9F8 279 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Prl7d1P04769 244 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Ddx58Q6Q899 926 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Hook3Q8BUK6 718 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Tmx3Q8BXZ1 456 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Slc26a8Q8R0C3 999 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Nup133Q8R0G9 1155 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 ZfxP17012 799 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Fsd1Q7TPM6 496 aa10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Eif4g1Q6NZJ6 1600 aaKnown RBP10.64□□□□□ -0.71
Ttc28-206ENSMUST00000156290 Slx4Q6P1D7 1565 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms