RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Nlrp3Q8R4B8 1033 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 GckrQ91X44 587 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Rbm5Q91YE7 815 aaKnown RBP12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Ssc5dQ8BV57 1371 aa12.15□□□□□ -0.46
Ssr3-202ENSMUST00000119896 Tnnt1O88346 262 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Vil1Q62468 827 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Gimap8Q75N62 688 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Cdca7Q9D0M2 382 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Taf7Q9R1C0 341 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Myo5bP21271 1818 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Flt1P35969 1333 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Zfp646Q6NV66 1788 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Csf1rP09581 977 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Zc3h15Q3TIV5 426 aaKnown RBP12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Map3k9Q3U1V8 1077 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Fam83gQ5SWY7 812 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Strip1Q8C079 837 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Glis2Q8VDL9 521 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Mapk8ip3Q9ESN9 1337 aa12.14□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Fkbp4P30416 458 aa12.13□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Rtkn2Q14B46 604 aa12.13□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Micall1Q8BGT6 870 aa12.13□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Cyp2d12Q8BVD2 504 aa12.13□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Trim34aQ99PP6 485 aa12.13□□□□□ -0.47
Ssr3-202ENSMUST00000119896 VegfbP49766 207 aa12.12□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Lrch1P62046 709 aa12.12□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Atxn2lQ7TQH0 1049 aaKnown RBP12.12□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Tspoap1Q7TNF8 1846 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Uhrf1bp1B2KF50 1429 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Erbb4Q61527 1308 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Las1lA2BE28 776 aaKnown RBP12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Dcdc2bF7BCK0 340 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Atp6v0a2P15920 856 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Cct4P80315 539 aaKnown RBP12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Trim52Q8CDV4 233 aa12.11□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Pibf1E9Q6K3 756 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Igfbp6P47880 238 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Insm1Q63ZV0 521 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Q7TT23 1179 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Gpr101Q80T62 511 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Flt4P35917 1363 aa12.1□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Susd4Q8BH32 490 aa12.09□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Thsd7bQ6P4U0 1607 aa12.09□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Nlgn2Q69ZK9 836 aa12.08□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Gnl3lQ6PGG6 577 aaKnown RBP12.08□□□□□ -0.47
Ssr3-202ENSMUST00000119896 SympkQ80X82 1284 aa12.08□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Foxp4Q9DBY0 795 aaKnown RBP12.08□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Foxo3Q9WVH4 672 aa12.08□□□□□ -0.47
Ssr3-202ENSMUST00000119896 Ttll7A4Q9F0 912 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Aknad1E9Q8N6 675 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Magea8O89012 320 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Chpf2Q3UU43 768 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Ubxn2aQ99KJ0 258 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Plagl1Q9JLQ4 704 aa12.08□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Mtcl1Q3UHU5 1945 aa12.07□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Scn9aQ62205 1984 aa12.07□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Eva1cP58659 440 aa12.07□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Rbm17Q8JZX4 405 aaKnown RBP12.07□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Fkbp1aP26883 108 aaKnown RBP12.06□□□□□ -0.48
Ssr3-202ENSMUST00000119896 WaslQ91YD9 501 aa12.06□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Nup188Q6ZQH8 1759 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Cavin4A2AMM0 362 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Glt1d1A4FUP9 346 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Hspa2P17156 633 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Chrna5Q2MKA5 467 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Psd3Q2PFD7 1037 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Pcsk7Q61139 770 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Tmem119Q8R138 280 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Swt1Q9DBQ9 907 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Anp32bQ9EST5 272 aaKnown RBP12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Sipa1l3G3X9J0 1776 aa12.05□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Sh3tc1G3X9F6 1346 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Eif6O55135 245 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Tbc1d32Q3URV1 1296 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Glg1Q61543 1175 aaKnown RBP12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Rpgrip1lQ8CG73 1264 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Cyp2ab1S4R196 498 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Pappa2E9PZ87 1789 aa12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Mybbp1aQ7TPV4 1344 aaKnown RBP12.04□□□□□ -0.48
Ssr3-202ENSMUST00000119896 1700019A02RikA0A087WPV9 146 aa12.03□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Hsp90ab1P11499 724 aaKnown RBP12.03□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Znf541Q0GGX2 1363 aa12.03□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Disp3A3KFU9 1347 aa12.03□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Ttc41Q692V3 1318 aa12.03□□□□□ -0.48
Ssr3-202ENSMUST00000119896 PnnO35691 725 aaKnown RBP12.02□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Map9Q3TRR0 646 aa12.02□□□□□ -0.48
Ssr3-202ENSMUST00000119896 PsapQ61207 557 aaKnown RBP12.02□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Ankib1Q6ZPS6 1085 aa12.02□□□□□ -0.48
Ssr3-202ENSMUST00000119896 Fstl1Q62356 306 aa12.02□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Plekhh1Q80TI1 1356 aa12.02□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Gm7347D3YYI9 267 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Speer4aF8VPX6 267 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Llgl2Q3TJ91 1027 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Q3TQI7 289 aaKnown RBP12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Tom1l2Q5SRX1 507 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 U2surpQ6NV83 1029 aaKnown RBP12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Ankle2Q6P1H6 964 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Gja10Q9WUS4 505 aa12.01□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Trpm7Q923J1 1863 aa12□□□□□ -0.49
Ssr3-202ENSMUST00000119896 Dpp7Q9ET22 506 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms