RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Rnf34Q99KR6 376 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Olr1Q9EQ09 363 aa17.93■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Gpatch8A2A6A1 1505 aa17.92■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cdan1Q8CC12 1239 aa17.92■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Rad50P70388 1312 aa17.92■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Exoc8Q6PGF7 716 aa17.92■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cc2d1bQ8BRN9 848 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Tmem266Q8BZB3 538 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 DmtnQ9WV69 405 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ano10Q8BH79 659 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Akap2O54931 893 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Tshz3Q8CGV9 1081 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Calml4Q91WQ9 153 aa17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Arhgef12Q8R4H2 1543 aaKnown RBP17.91■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Zmym3Q9JLM4 1370 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ccdc112A0AUP1 442 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cfap73J3QPZ5 306 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Ctage5Q8R311 779 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Cwc25Q9DBF7 416 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Metap2O08663 478 aaKnown RBP17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Klf15Q9EPW2 415 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Brd3Q8K2F0 726 aaKnown RBP17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Sil1Q9EPK6 465 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Atp8b2P98199 1209 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 SfswapQ3USH5 945 aaKnown RBP17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Krt25Q8VCW2 446 aa17.9■□□□□ 0.46
Pcdha9-201ENSMUST00000115659 Pdia3P27773 505 aaKnown RBP17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Cnga2Q62398 664 aa17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Rai14Q9EP71 979 aaKnown RBP17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Nphp3Q7TNH6 1325 aa17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Spg7Q3ULF4 781 aa17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Bin1O08539 588 aaKnown RBP17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Dapk3O54784 448 aa17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 FanclQ9CR14 375 aa17.89■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Gm45140A0A0N4SUM8 220 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Speer4dL7N216 212 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 GmnnO88513 206 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Wdhd1P59328 1117 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ddx10Q80Y44 875 aaKnown RBP17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 3425401B19RikD3Z1D3 1412 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Map2k1P31938 393 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Hook3Q8BUK6 718 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Aldh1l2Q8K009 923 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Tbc1d7Q9D0K0 293 aa17.88■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Izumo3A6PWV3 263 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Catsper2A2ARP9 588 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Gm21985Q6P6P5 1106 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Kdm4aQ8BW72 1064 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ccdc155Q80VJ8 648 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Gng11P61953 73 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Mcm10Q0VBD2 885 aa17.87■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Uchl5Q9WUP7 329 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Bbof1Q3V079 533 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Zscan29E9Q5B4 869 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Trap1aP19473 224 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Mapkbp1Q6NS57 1503 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ncoa3O09000 1398 aa17.86■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Rbm8a2A0A0N4SUH6 174 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Tbc1d8bA3KGB4 1114 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Hs2st1Q8R3H7 356 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Rbm8aQ9CWZ3 174 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Plekho1Q9JIY0 408 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Nucb1Q02819 459 aaKnown RBP17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Zap70P43404 618 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Tubb4bP68372 445 aaKnown RBP17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Igf2bp2Q5SF07 592 aaKnown RBP17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Smc1aQ9CU62 1233 aaKnown RBP17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 BicraF8VPZ9 1578 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Fam135bQ9DAI6 1403 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Mcmdc2E9Q956 681 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Cetn1P41209 172 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Vps18Q8R307 973 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Kcnj4P52189 445 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Clul1Q3ZRW6 464 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Fam160b2Q80YR2 744 aa17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ccdc12Q8R344 166 aaKnown RBP17.85■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Bicdl1A0JNT9 577 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Rbbp8nlA2ABX0 614 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Aplp1Q03157 653 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ppp4r3aQ6P2K6 820 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ppp1r10Q80W00 888 aaKnown RBP17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ctr9Q62018 1173 aaKnown RBP17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Thoc2B1AZI6 1594 aaKnown RBP17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 U2af1l4Q8BGJ9 220 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Ano2Q8CFW1 1002 aa17.84■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Cul5Q9D5V5 780 aa17.83■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Slx4ipQ9D7Y9 413 aa17.83■□□□□ 0.45
Pcdha9-201ENSMUST00000115659 Cnnm2Q3TWN3 875 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Znf692Q3U381 531 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Kmt5bQ3U8K7 883 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Snx13Q6PHS6 957 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Frmpd2A0A140LI67 1392 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Cpsf1Q9EPU4 1441 aaKnown RBP17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Klc3Q91W40 508 aa17.83■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Pkd2l2Q9JLG4 621 aa17.82■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Kdm5bQ80Y84 1544 aa17.82■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Cacna2d4Q5RJF7 1116 aa17.82■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Nfxl1E9Q8I7 918 aaKnown RBP17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Ppp1r21Q3TDD9 780 aa17.81■□□□□ 0.44
Pcdha9-201ENSMUST00000115659 Podxl2Q8CAE9 603 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms