RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm10093D3YYI8 482 aa31,61■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Hdac1O09106 482 aaKnown RBP31,61■■■□□ 2,65
Tpm1-216ENSMUST00000113707 RestQ8VIG1 1082 aa31,61■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Pde4dQ01063 747 aa31,6■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Gnat3Q3V3I2 354 aa31,6■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Zbtb3Q91X45 518 aa31,6■■■□□ 2,65
Tpm1-216ENSMUST00000113707 AbraQ8BUZ1 375 aa31,59■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Gigyf1Q99MR1 1044 aaKnown RBP31,59■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Ank1Q02357 1862 aa31,59■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Mre11Q61216 706 aa31,59■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Cacna1sQ02789 1880 aa31,58■■■□□ 2,65
Tpm1-216ENSMUST00000113707 AK157302I3ITR1 129 aa31,58■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Ppip5k2Q6ZQB6 1129 aa31,58■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Isca1Q9D924 129 aa31,58■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Ehd4Q9EQP2 541 aa31,58■■■□□ 2,65
Tpm1-216ENSMUST00000113707 Tpx2A2APB8 745 aaKnown RBP31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Sf3b2Q3UJB0 878 aaKnown RBP31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 GpkowQ56A08 488 aa31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Gnl3lQ6PGG6 577 aaKnown RBP31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Cwc25Q9DBF7 416 aa31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Stard3nlQ9DCI3 235 aa31,57■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Sipa1l3G3X9J0 1776 aa31,56■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Sos2Q02384 1333 aa31,56■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Mrc1Q61830 1456 aa31,56■■■□□ 2,64
Tpm1-216ENSMUST00000113707 GorabQ8BRM2 368 aa31,56■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Clcn1Q64347 994 aa31,55■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Tmem87bQ8BKU8 555 aa31,55■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Emilin2Q8K482 1074 aa31,55■■■□□ 2,64
Tpm1-216ENSMUST00000113707 ArxO35085 564 aa31,55■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Myd88P22366 296 aa31,53■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Erc2Q6PH08 957 aa31,53■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Kndc1Q0KK55 1742 aa31,53■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Tfip11Q9ERA6 838 aaKnown RBP31,52■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Ltb4r2Q9JJL9 360 aa31,52■■■□□ 2,64
Tpm1-216ENSMUST00000113707 MetP16056 1379 aa31,51■■■□□ 2,64
Tpm1-216ENSMUST00000113707 Adora1Q60612 326 aa31,5■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Ankib1Q6ZPS6 1085 aa31,48■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Nip7Q9CXK8 180 aaKnown RBP31,48■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Rnf123Q5XPI3 1314 aa31,48■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Tnrc6cQ3UHC0 1690 aaKnown RBP31,48■■■□□ 2,63
Tpm1-216ENSMUST00000113707 CalcaP70160 136 aa31,47■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Fam213aQ9CYH2 218 aa31,47■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Sf3a1Q8K4Z5 791 aaKnown RBP31,46■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Prune1Q8BIW1 454 aa31,46■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Smc4Q8CG47 1286 aa31,46■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Nol8Q3UHX0 1147 aaKnown RBP31,45■■■□□ 2,63
Tpm1-216ENSMUST00000113707 Unc5clQ6R653 518 aa31,45■■■□□ 2,63
Tpm1-216ENSMUST00000113707 InhbeO08717 350 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Hsp90b1P08113 802 aaKnown RBP31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Fam228bQ497Q6 232 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Pde3bQ61409 1100 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Eno4Q8C042 619 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Ets1P27577 440 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 NexnQ7TPW1 607 aa31,44■■■□□ 2,62
Tpm1-216ENSMUST00000113707 1700010I14RikQ7TPG0 532 aa31,43■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Q8C5K5 320 aa31,43■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Taf5lQ91WQ5 589 aa31,42■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Edc3Q8K2D3 508 aaKnown RBP31,42■■■□□ 2,62
Tpm1-216ENSMUST00000113707 DiexfQ8BTT6 772 aaKnown RBP31,41■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Nlrp3Q8R4B8 1033 aa31,41■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Zbtb1Q91VL9 713 aa31,41■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Klc3Q91W40 508 aa31,41■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Bag3Q9JLV1 577 aaKnown RBP31,4■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Arap2Q8BZ05 1703 aa31,4■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Prl3d2F6R3P9 224 aa31,4■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Prl3d3A0A0M6L0J6 224 aa31,39■■■□□ 2,62
Tpm1-216ENSMUST00000113707 Brf1Q8CFK2 676 aa31,38■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Slc26a8Q8R0C3 999 aa31,38■■■□□ 2,61
Tpm1-216ENSMUST00000113707 EngaseQ8BX80 734 aa31,38■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Rps6ka4Q9Z2B9 773 aa31,38■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Tbc1d4Q8BYJ6 1307 aa31,37■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Jarid2Q62315 1234 aa31,37■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Ppp4r3aQ6P2K6 820 aa31,37■■■□□ 2,61
Tpm1-216ENSMUST00000113707 AtrnQ9WU60 1428 aa31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Terf2O35144 541 aa31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Rbm27Q5SFM8 1060 aaKnown RBP31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Rapgef4Q9EQZ6 1011 aa31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Ric1Q69ZJ7 1422 aa31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Ssc5dQ8BV57 1371 aa31,36■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Prr29B1ARI9 187 aa31,35■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Kdm4cQ8VCD7 1054 aa31,35■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Stk3Q9JI10 497 aa31,35■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Sema6bO54951 886 aa31,34■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Sult6b1P0CC03 303 aa31,34■■■□□ 2,61
Tpm1-216ENSMUST00000113707 AppP12023 770 aa31,34■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Nlrp1aQ2LKU9 1182 aa31,34■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Ttc19Q8CC21 365 aa31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Nhsl1Q8CAF4 1587 aa31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Adam1aQ60813 791 aa31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Clca2Q8BG22 942 aa31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Dis3l2Q8CI75 870 aaKnown RBP31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Cntnap1O54991 1385 aa31,33■■■□□ 2,61
Tpm1-216ENSMUST00000113707 Fkbp1aP26883 108 aaKnown RBP31,32■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Mrps27Q8BK72 415 aaKnown RBP31,32■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Dhx38Q80X98 1228 aa31,31■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Bsdc1Q80Y55 427 aa31,31■■■□□ 2,6
Tpm1-216ENSMUST00000113707 4930504O13RikQ8C5Z9 145 aa31,31■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Abca3Q8R420 1704 aa31,31■■■□□ 2,6
Tpm1-216ENSMUST00000113707 MccE9PWI3 1003 aa31,31■■■□□ 2,6
Tpm1-216ENSMUST00000113707 MypopQ8R4U1 393 aa31,31■■■□□ 2,6
Retrieved 100 of 22,080 RNA–protein pairs in 11,2 ms