RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Ccdc171E9Q1U1 1324 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Kdm2bQ6P1G2 1309 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Nsd3Q6P2L6 1439 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Mfap1aC0HKD8 439 aaKnown RBP12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Mfap1bC0HKD9 439 aaKnown RBP12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Vamp4O70480 141 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Tnnt1O88346 262 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Atg3Q9CPX6 314 aa12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Msh6P54276 1358 aaKnown RBP12.56□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Trim26Q99PN3 545 aa12.55□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Cap2Q9CYT6 476 aa12.55□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Col1a2Q01149 1372 aa12.55□□□□□ -0.4
Tpm1-213ENSMUST00000113697 AceP09470 1312 aa12.55□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Ccdc6D3YZP9 469 aa12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Slc4a3P16283 1227 aa12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Eif4a1P60843 406 aaKnown RBP12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Dok7Q18PE0 504 aa12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Adamtsl1Q8BLI0 1745 aa12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Smg7Q5RJH6 1138 aaKnown RBP12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Cyp2d12Q8BVD2 504 aa12.54□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Kndc1Q0KK55 1742 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Col22a1E9Q7P1 1613 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Sos2Q02384 1333 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Vars2Q3U2A8 1060 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Gigyf2Q6Y7W8 1291 aaKnown RBP12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Alkbh8Q80Y20 664 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Jmjd4Q8BFT6 427 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Ccdc60Q8C4J0 545 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 PigbQ9JJQ0 542 aa12.53□□□□□ -0.4
Tpm1-213ENSMUST00000113697 Dcaf5Q80T85 946 aa12.52□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Kiaa0319lQ8K135 1048 aa12.52□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Polr3glQ8R0C0 218 aa12.52□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Chmp5Q9D7S9 219 aa12.52□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Adra2bP30545 450 aa12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Q3TQI7 289 aaKnown RBP12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Chpf2Q3UU43 768 aa12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Smc5Q8CG46 1101 aaKnown RBP12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Chst12Q99LL3 419 aa12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 KarsQ99MN1 595 aaKnown RBP12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Snapc4Q8BP86 1333 aa12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Bicdl1A0JNT9 577 aa12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Cavin2Q63918 418 aaKnown RBP12.51□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Nav1Q8CH77 1875 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Trbv21A0A0A6YX06 97 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Gm6268A2A3U9 297 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 G3bp1P97855 465 aaKnown RBP12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Cnnm1Q0GA42 951 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Dnajc14Q921R4 703 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 TefQ9JLC6 301 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Znf521Q6KAS7 1311 aa12.5□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Chl1P70232 1209 aa12.49□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Atf4Q06507 349 aa12.49□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Kank4Q6P9J5 1016 aa12.49□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Ankrd13dQ6PD24 605 aa12.49□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Iqsec3Q3TES0 1195 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Pim2Q62070 370 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Plekhm2Q80TQ5 1018 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Tmem119Q8R138 280 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 GckrQ91X44 587 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Rangap1P46061 589 aaKnown RBP12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Clcn1Q64347 994 aa12.48□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Prkab2Q6PAM0 271 aa12.47□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Chmp4bQ9D8B3 224 aaKnown RBP12.47□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Mnx1Q9QZW9 404 aa12.47□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Taf7Q9R1C0 341 aa12.47□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Syde2E9PUP1 1314 aa12.47□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Cnksr1A2A9K7 700 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 PsapQ61207 557 aaKnown RBP12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Prrt3Q6PE13 971 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Lrfn2Q80TG9 788 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Miga2Q8BK03 593 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Flad1Q8R123 492 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Tmc1Q8R4P5 757 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Atl3Q91YH5 541 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Adcy9P51830 1353 aa12.46□□□□□ -0.41
Tpm1-213ENSMUST00000113697 Dab2P98078 766 aa12.45□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Igsf3Q6ZQA6 1194 aa12.45□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Dsg2O55111 1122 aa12.45□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Tbc1d12Q6A039 696 aa12.45□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Kcnn1Q9EQR3 537 aa12.45□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Gm45233A0A0N4SVE0 221 aa12.44□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Smarcc1P97496 1104 aa12.44□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Ppm1gQ61074 542 aa12.44□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Ric1Q69ZJ7 1422 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Cers3Q1A3B0 383 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Ccdc34Q3UI66 367 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Gm12185Q5NCB2 835 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Morc2aQ69ZX6 1030 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Tmco5bQ80X59 307 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 SympkQ80X82 1284 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Slc39a6Q8C145 765 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Mylk2Q8VCR8 613 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Sipa1l3G3X9J0 1776 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Col4a1P02463 1669 aa12.43□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Gm13023A2A8N2 498 aa12.42□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Nectin2P32507 530 aa12.42□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Aplp1Q03157 653 aa12.42□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Q3UPC7 1272 aa12.42□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Ccdc27Q3V036 639 aa12.42□□□□□ -0.42
Tpm1-213ENSMUST00000113697 Ccdc85aQ5SP85 500 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms