RNA–Protein interactions for RNA: ENSMUST00000109076.1

Cdkl3-203, Transcript of Cyclin-dependent kinase-like 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cdkl3, Length 1,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3-203ENSMUST00000109076 Ppp1r42Q8R1Z4 357 aa22.51■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Atp1b3P97370 278 aa22.5■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Snai1Q02085 264 aa22.5■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 HmcesQ8R1M0 353 aaKnown RBP22.5■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 RtcbQ99LF4 505 aaKnown RBP22.5■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Ier5O89113 308 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Cwc27Q3TKY6 469 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Srgap3Q812A2 1099 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Atl3Q91YH5 541 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Supt16hQ920B9 1047 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Tceal9Q9DD24 104 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Wwc1Q5SXA9 1104 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Tgfb1i1Q62219 461 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Nlrp9bQ66X22 1003 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Fam213aQ9CYH2 218 aa22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Sart3Q9JLI8 962 aaKnown RBP22.49■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Casz1Q9CWL2 1761 aa22.48■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 ScaperF8VQ70 1398 aaKnown RBP22.47■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Apba2P98084 750 aa22.47■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Gnat3Q3V3I2 354 aa22.47■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Zfyve9A2A8R0 1397 aa22.47■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Ifit1bl2Q3U687 466 aa22.46■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Ubr3Q5U430 1889 aa22.46■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Cyp19a1P28649 503 aa22.46■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 SkilQ60665 675 aa22.46■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 InsrrQ9WTL4 1300 aa22.45■■□□□ 1.19
Cdkl3-203ENSMUST00000109076 Mmp8O70138 465 aa22.45■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Fam198bQ3UPI1 517 aa22.45■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Clca2Q8BG22 942 aa22.45■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Trim34aQ99PP6 485 aa22.45■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Ankrd31A0A140LI88 1765 aa22.44■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Chmp5Q9D7S9 219 aa22.44■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 NgdnQ9DB96 315 aaKnown RBP22.44■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Nphp1Q9QY53 687 aa22.44■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 MeiocA2AG06 965 aa22.43■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Srp68Q8BMA6 625 aaKnown RBP22.43■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 GpkowQ56A08 488 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Amhr2Q8K592 568 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 CarsQ9ER72 831 aaKnown RBP22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 LifrP42703 1092 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Rtkn2Q14B46 604 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Susd4Q8BH32 490 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 OscarQ8VBT3 265 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Spata31d1bE9QA57 1361 aa22.42■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 VgfQ0VGU4 617 aa22.41■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Slc4a10Q5DTL9 1118 aa22.41■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Eif4g2Q62448 906 aaKnown RBP22.41■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Foxo4Q9WVH3 505 aa22.41■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Greb1lB9EJV3 1913 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Ubn2Q80WC1 1314 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Cyp2c23E9Q5K4 494 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Dctn1O08788 1281 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Npy5rO70342 466 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Ttc19Q8CC21 365 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 GptQ8QZR5 496 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Plch1Q4KWH5 1682 aa22.4■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Kiaa0232Q80U59 1396 aaKnown RBP22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Cops6O88545 324 aa22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 NppbP40753 121 aa22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Plcb3P51432 1234 aaKnown RBP22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Igflr1Q3U4N7 345 aa22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Dbr1Q923B1 550 aa22.39■■□□□ 1.18
Cdkl3-203ENSMUST00000109076 Col11a2Q64739 1736 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Mcmdc2E9Q956 681 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Zc3h12cQ5DTV4 884 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Adora1Q60612 326 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Aldh8a1Q8BH00 487 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Smc4Q8CG47 1286 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Sumf1Q8R0F3 372 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 FanclQ9CR14 375 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Mapk8ip1Q9WVI9 707 aa22.39■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Myh1Q5SX40 1942 aa22.38■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 CanxP35564 591 aaKnown RBP22.38■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 NexnQ7TPW1 607 aa22.38■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Gm38655A0A286YDK6 273 aa22.37■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 B4galnt3Q6L8S8 986 aa22.37■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 EspnQ9ET47 871 aa22.37■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Stox1B2RQL2 990 aa22.36■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Pa2g4P50580 394 aaKnown RBP22.36■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Gimap8Q75N62 688 aa22.36■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Tlr8P58682 1032 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Tktl2Q9D4D4 627 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Atg4a-psA0A0G2JFS9 396 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Brd1E9PZ26 1189 aaKnown RBP22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Atg4aQ8C9S8 396 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Cetn4Q8K4K1 168 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Smarca5Q91ZW3 1051 aaKnown RBP22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Duox1A2AQ92 1551 aa22.35■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Prl3d2F6R3P9 224 aa22.34■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 CltaO08585 235 aa22.34■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Hsp90ab1P11499 724 aaKnown RBP22.34■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Zbtb38Q3LR78 1197 aa22.34■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Tmem87bQ8BKU8 555 aa22.34■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Jdp2P97875 163 aa22.33■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Cgnl1Q6AW69 1298 aa22.33■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Rbm26Q6NZN0 1012 aaKnown RBP22.33■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Akt1s1Q9D1F4 257 aa22.33■■□□□ 1.17
Cdkl3-203ENSMUST00000109076 Mybbp1aQ7TPV4 1344 aaKnown RBP22.33■■□□□ 1.16
Cdkl3-203ENSMUST00000109076 Cyp7a1Q64505 503 aa22.32■■□□□ 1.16
Cdkl3-203ENSMUST00000109076 Gcc1Q9D4H2 778 aa22.32■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms