RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ankle2Q6P1H6 964 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Kiaa1524Q8BWY9 907 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Sbno1Q689Z5 1390 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Rad17Q6NXW6 688 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Hs2st1Q8R3H7 356 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Trim25Q61510 634 aaKnown RBP12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ppp4r3aQ6P2K6 820 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Rapgef3Q8VCC8 918 aa12.03□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Jmjd4Q8BFT6 427 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Rnf34Q99KR6 376 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Srgap1Q91Z69 1062 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ces1hD3Z298 562 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Nf2P46662 596 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Galntl5Q9D4M9 431 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Cul5Q9D5V5 780 aa12.02□□□□□ -0.48
Scn8a-201ENSMUST00000082209 Ccdc112A0AUP1 442 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Q3UJC8 639 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cpsf1Q9EPU4 1441 aaKnown RBP12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 TnikP83510 1323 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Kiaa1211Q5PR69 1207 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 LifrP42703 1092 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Kcnj4P52189 445 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Adcy5P84309 1262 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Sass6Q80UK7 654 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rnf187Q8BFX1 236 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Sil1Q9EPK6 465 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tbc1d9Q3UYK3 1264 aa12.02□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Speer4dL7N216 212 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Hdgfl1Q2VPR5 283 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Hecw1Q8K4P8 1604 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Noc2lQ9WV70 747 aaKnown RBP12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Trim30cD3YVI9 513 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Astn2Q80Z10 1352 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Echdc1Q9D9V3 322 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Trappc8E9PWG2 1437 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ctr9Q62018 1173 aaKnown RBP12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ccdc178Q8CDV0 866 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 CenppQ9CZ92 286 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ppfibp2O35711 882 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Hmgb1P63158 215 aaKnown RBP12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ppfia1B2RXQ2 1266 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Exoc8Q6PGF7 716 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tubb2aQ7TMM9 445 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tubb2bQ9CWF2 445 aa12.01□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Apol7aB2RT54 418 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gas2l3Q3UWW6 683 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cep135Q6P5D4 1140 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Wdr63B2RY71 923 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Irf9Q61179 399 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Nop53Q8BK35 484 aaKnown RBP12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ncbp3Q8BZR9 615 aaKnown RBP12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rad50P70388 1312 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ggnbp2Q5SV77 696 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Naip7Q9JIB3 1402 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Pdia4P08003 638 aaKnown RBP12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Krt79Q8VED5 531 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Setdb1O88974 1307 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rsph6aQ8CDR2 708 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Aldh1l2Q8K009 923 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Znf704Q9ERQ3 566 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Pprc1Q6NZN1 1644 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 L3mbtl2P59178 703 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Unc13aQ4KUS2 1712 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cc2d1bQ8BRN9 848 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Atp10dQ8K2X1 1416 aa12□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Slc5a1Q8C3K6 665 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gle1Q8R322 699 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tmco5aQ9D9D5 303 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gm42641I6L9G2 585 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 AtripQ8BMG1 785 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Syce1Q9D495 329 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Nup133Q8R0G9 1155 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rbm33Q9CXK9 1231 aaKnown RBP11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Baiap2l1Q9DBJ3 514 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Pkd2l2Q9JLG4 621 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Lamc1P02468 1607 aaKnown RBP11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ankrd44B2RXR6 993 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Diaph1O08808 1255 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 GpkowQ56A08 488 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gas8Q60779 478 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tmem67Q8BR76 992 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gm10093D3YYI8 482 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Hdac1O09106 482 aaKnown RBP11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rassf2Q8BMS9 326 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 NpcdF8VQB8 469 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Dync1i1O88485 628 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gnat2P50149 354 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cnga2Q62398 664 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Izumo3A6PWV3 263 aa11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 NgdnQ9DB96 315 aaKnown RBP11.99□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Gigyf2Q6Y7W8 1291 aaKnown RBP11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 SfpqQ8VIJ6 699 aaKnown RBP11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 IqcgQ80W32 419 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Pde3aQ9Z0X4 1141 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rasal2E9PW37 1286 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Lrsam1Q80ZI6 727 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Babam1Q3UI43 333 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Afap1Q80YS6 731 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Pym1Q8CHP5 203 aaKnown RBP11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Map3k13Q1HKZ5 959 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms