RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Chl1P70232 1209 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Zc3h12cQ5DTV4 884 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 PrimpolQ6P1E7 537 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Ppm1mQ8BU27 406 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Spon1Q8VCC9 807 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Trim34aQ99PP6 485 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Speer4f1Q9D5Q6 258 aa15.7■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 1700019A02RikA0A087WPV9 146 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 AK157302I3ITR1 129 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Dctn1O08788 1281 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Vamp4O70480 141 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Cyp2d11P24457 504 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Fhdc1Q3ULZ2 1149 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Isca1Q9D924 129 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Ltb4r2Q9JJL9 360 aa15.69■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 MypnQ5DTJ9 1315 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 D830030K20RikE9PYQ5 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Gm3043K7N693 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Gm16440K7N6G6 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Gm2244L7N2A3 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Gm3278L7N2D2 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Gm8271L7N2E2 218 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 NogP97466 232 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Thrap3Q569Z6 951 aaKnown RBP15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Adam1aQ60813 791 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Pdzph1Q8BGR1 1238 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Susd4Q8BH32 490 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Strip1Q8C079 837 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 St5Q924W7 1134 aa15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Senp3Q9EP97 568 aaKnown RBP15.68■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Zfp646Q6NV66 1788 aa15.67■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Hspa2P17156 633 aa15.67■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 TrhQ62361 256 aa15.67■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Nup188Q6ZQH8 1759 aa15.67■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Mtcl1Q3UHU5 1945 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Myh1Q5SX40 1942 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Pde4bB1AWC9 736 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 NudcO35685 332 aaKnown RBP15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Hsp90ab1P11499 724 aaKnown RBP15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Cct4P80315 539 aaKnown RBP15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Irf9Q61179 399 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Ccdc30Q8BVF4 654 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Echdc1Q9D9V3 322 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Ttc41Q692V3 1318 aa15.66■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Pcsk7Q61139 770 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Unc5clQ6R653 518 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Atxn2lQ7TQH0 1049 aaKnown RBP15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 NrdcQ8BHG1 1161 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Dbndd1Q9CZ00 160 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Foxo3Q9WVH4 672 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Mapk8ip1Q9WVI9 707 aa15.65■□□□□ 0.1
Ccdc28a-202ENSMUST00000080860 Cyp2c68K7N6C2 491 aa15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Cavin2Q63918 418 aaKnown RBP15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Insm1Q63ZV0 521 aa15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 KarsQ99MN1 595 aaKnown RBP15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Pde3aQ9Z0X4 1141 aa15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Disp3A3KFU9 1347 aa15.64■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Atp6v0a2P15920 856 aa15.63■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Cyp19a1P28649 503 aa15.63■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Bicc1Q99MQ1 977 aaKnown RBP15.63■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Foxo4Q9WVH3 505 aa15.63■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Gas2l2Q5SSG4 860 aa15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Fam83gQ5SWY7 812 aa15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Dpf2Q61103 391 aaKnown RBP15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Neurod2Q62414 383 aa15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ehd4Q9EQP2 541 aa15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Setdb1O88974 1307 aa15.62■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Yy1Q00899 414 aa15.61■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ankib1Q6ZPS6 1085 aa15.61■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 B4galnt4Q766D5 1034 aa15.61■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Cd248Q91V98 765 aa15.61■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Slc34a2Q9DBP0 697 aa15.61■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Zfp444Q3TDV8 331 aaKnown RBP15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ksr2Q3UVC0 959 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 MarsQ68FL6 902 aaKnown RBP15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Soga3Q6NZL0 945 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Atp2b4Q6Q477 1205 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ddx58Q6Q899 926 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Sf3b3Q921M3 1217 aaKnown RBP15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Pik3ap1Q9EQ32 811 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Mybbp1aQ7TPV4 1344 aaKnown RBP15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Scn9aQ62205 1984 aa15.6■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Olfr247E9PVJ7 320 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 NpcdF8VQB8 469 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Olfr819K7N727 320 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Psd3Q2PFD7 1037 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Map3k9Q3U1V8 1077 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 HellsQ60848 821 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ttc14Q9CSP9 761 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ptf1aQ9QX98 324 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Btaf1E9QAE3 1848 aa15.59■□□□□ 0.09
Ccdc28a-202ENSMUST00000080860 Ccdc171E9Q1U1 1324 aa15.58■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Sh3tc1G3X9F6 1346 aa15.58■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 CfhP06909 1234 aa15.57■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 ArsiQ32KI9 573 aa15.57■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Ripor2Q80U16 1078 aa15.57■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Clca2Q8BG22 942 aa15.57■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Gjd4Q8BSD4 364 aa15.57■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Myd88P22366 296 aa15.56■□□□□ 0.08
Ccdc28a-202ENSMUST00000080860 Map3k2Q61083 619 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms