RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 Ccdc34Q3UI66 367 aa16.17■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Vps33aQ9D2N9 598 aa16.17■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Txnrd1Q9JMH6 613 aa16.17■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Gsdma3Q5Y4Y6 464 aa16.17■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Rab11fip3Q8CHD8 1047 aa16.17■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Arid4aF8VPQ2 1261 aaKnown RBP16.16■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Mrps27Q8BK72 415 aaKnown RBP16.16■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Nlrp3Q8R4B8 1033 aa16.16■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Gm11983V9GXS8 105 aa16.16■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Zscan29E9Q5B4 869 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Ms4a1P19437 291 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Cdk4P30285 303 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 CebpzP53569 1052 aaKnown RBP16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Rab3gap1Q80UJ7 981 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Smim5Q8BT42 78 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 OptnQ8K3K8 584 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 MvpQ9EQK5 861 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Bcl9lQ67FY2 1494 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Rtf1A2AQ19 715 aaKnown RBP16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Pdia3P27773 505 aaKnown RBP16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Usp16Q99LG0 825 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Ifi35Q9D8C4 286 aa16.15■□□□□ 0.18
Nkx6-3-201ENSMUST00000071588 Klhl34A2AI76 644 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 HdgfP51859 237 aaKnown RBP16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cavin2Q63918 418 aaKnown RBP16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Spata32Q8C5V0 334 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ankrd44B2RXR6 993 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Gm10471E9Q1C7 252 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Snap23O09044 210 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 CrklP47941 303 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Fam53cQ8BXQ8 393 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 TkfcQ8VC30 578 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 ZgpatQ8VDM1 511 aa16.14■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Lcmt1A0A0U1RNF2 332 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 RdxP26043 583 aaKnown RBP16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Trim27Q62158 513 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cgnl1Q6AW69 1298 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 U2surpQ6NV83 1029 aaKnown RBP16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 NexnQ7TPW1 607 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Aldh8a1Q8BH00 487 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Col15a1O35206 1367 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Arglu1Q3UL36 271 aaKnown RBP16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Casc1Q6TDU8 730 aa16.13■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Rnf123Q5XPI3 1314 aa16.12■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ppp1r37Q8BKR5 712 aa16.12■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Klhdc4Q921I2 584 aa16.12■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Creld2Q9CYA0 350 aa16.12■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cdhr2E9Q7P9 1308 aa16.12■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Zkscan16A2ALW2 728 aa16.11■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ccdc162pQ0VG85 912 aa16.11■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Kansl3A2RSY1 903 aaKnown RBP16.11■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Tom1O88746 492 aa16.11■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Hspa1lP16627 641 aa16.11■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cfap73J3QPZ5 306 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Zranb3Q6NZP1 1069 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Amotl1Q9D4H4 968 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Utp3Q9JI13 469 aaKnown RBP16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Trpm3Q5F4S9 1721 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Brpf3B2KF05 1204 aaKnown RBP16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ggnbp2Q5SV77 696 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 RgmbQ7TQ33 436 aa16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ccar2Q8VDP4 922 aaKnown RBP16.1■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ahnak2E9PYB0 1738 aaKnown RBP16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Serpinb6bO08804 377 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Kmt5bQ3U8K7 883 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Zeb2Q9R0G7 1215 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Syt10Q9R0N4 523 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Arfgef2A2A5R2 1792 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cspp1B2RX88 1205 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Cpa2Q504N0 417 aa16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Ybx3Q9JKB3 361 aaKnown RBP16.09■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Simc1E9Q6E9 1354 aa16.08■□□□□ 0.17
Nkx6-3-201ENSMUST00000071588 Zscan22Q8BGS5 496 aa16.08■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Ddx54Q8K4L0 874 aaKnown RBP16.08■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Nop14Q8R3N1 860 aaKnown RBP16.08■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Qtrt2B8ZXI1 415 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Samd1D3YXK1 519 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Prim1P20664 417 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Cfap157Q0VFX2 523 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 MarsQ68FL6 902 aaKnown RBP16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 1700019A02RikA0A087WPV9 146 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Rtel1Q0VGM9 1203 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Ccz1Q8C1Y8 480 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Gcc1Q9D4H2 778 aa16.07■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Pibf1E9Q6K3 756 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Mum1Q6DID5 682 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 St18Q80TY4 1045 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Znf526Q8BI66 675 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Naa30Q8CES0 364 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Ap5z1Q3U829 807 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Cchcr1Q8K2I2 770 aa16.06■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Mcm2P97310 904 aa16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Eif4g2Q62448 906 aaKnown RBP16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Otud6bQ8K2H2 294 aa16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Med4Q9CQA5 270 aa16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Iqca1Q9CUL5 857 aa16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Add3Q9QYB5 706 aaKnown RBP16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Adgrb1Q3UHD1 1582 aa16.05■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 Wdr93Q402B2 695 aa16.04■□□□□ 0.16
Nkx6-3-201ENSMUST00000071588 TfrcQ62351 763 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms