RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Taf7Q9R1C0 341 aa13.74□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Cnnm1Q0GA42 951 aa13.74□□□□□ -0.21
Ddx55-201ENSMUST00000071057 PigbQ9JJQ0 542 aa13.74□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Hspa2P17156 633 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Irf9Q61179 399 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Larp1Q6ZQ58 1072 aaKnown RBP13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Asic4Q7TNS7 539 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Pdia6Q922R8 440 aaKnown RBP13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Speer4bQ9D9F7 267 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Tpx2A2APB8 745 aaKnown RBP13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Tgfb1i1Q62219 461 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Prkab2Q6PAM0 271 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Tmem119Q8R138 280 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Atg3Q9CPX6 314 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Dmrtc1Q9D9R7 182 aa13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Riok3Q9DBU3 519 aaKnown RBP13.73□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Slc39a6Q8C145 765 aa13.72□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Map7d2A2AG50 781 aa13.72□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Spryd3E9Q9B3 442 aa13.72□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Ttll7A4Q9F0 912 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Pa2g4P50580 394 aaKnown RBP13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Erc2Q6PH08 957 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 EngaseQ8BX80 734 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Bicc1Q99MQ1 977 aaKnown RBP13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Flt4P35917 1363 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Brinp3Q499E0 766 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Prdm4Q80V63 803 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 4930572O03RikQ8C5Y0 211 aa13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Mrvi1Q9WUX5 899 aaKnown RBP13.71□□□□□ -0.21
Ddx55-201ENSMUST00000071057 Gm21663A0A0G2JE01 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gm7361D3Z6R1 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 5031410I06RikE9Q4E0 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gm1979E9QAN3 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gm5862K7N5V5 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gm10220K7N660 267 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Pdia4P08003 638 aaKnown RBP13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Antxr1Q9CZ52 562 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 TefQ9JLC6 301 aa13.71□□□□□ -0.22
Ddx55-201ENSMUST00000071057 BcorQ8CGN4 1759 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Tns2Q8CGB6 1400 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Iqsec3Q3TES0 1195 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Zpr1Q62384 459 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Ripk4Q9ERK0 786 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 MafgO54790 162 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Tceal9Q9DD24 104 aa13.7□□□□□ -0.22
Ddx55-201ENSMUST00000071057 1700010I14RikQ7TPG0 532 aa13.69□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Lmbr1lQ9D1E5 489 aa13.69□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Slc5a1Q8C3K6 665 aa13.69□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gm21680A0A0G2JGR8 267 aa13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Zfp142G5E869 1843 aa13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Ddx46Q569Z5 1032 aaKnown RBP13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Jarid2Q62315 1234 aa13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Smim5Q8BT42 78 aa13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Eif3bQ8JZQ9 803 aaKnown RBP13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Stk3Q9JI10 497 aa13.68□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Grm8P47743 908 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Hmgb1P63158 215 aaKnown RBP13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Kdm4cQ8VCD7 1054 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Noc3lQ8VI84 807 aaKnown RBP13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Slit1Q80TR4 1531 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 AppP12023 770 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Tnks1bp1P58871 1720 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Pwp2Q8BU03 919 aaKnown RBP13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Efcab2Q9CQ46 164 aa13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Elp1Q7TT37 1333 aaKnown RBP13.67□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Rsph3aQ3UFY4 516 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Tshz3Q8CGV9 1081 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Edc3Q8K2D3 508 aaKnown RBP13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Pdlim2Q8R1G6 349 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 FocadA2AKG8 1798 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Plcb2A3KGF7 1181 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Sema3fO88632 785 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 HdgfP51859 237 aaKnown RBP13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Gabpb2P81069 414 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Zbtb45Q52KG4 520 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Fbxo41Q6NS60 873 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Cadps2Q8BYR5 1297 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Eif3aP23116 1344 aaKnown RBP13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Zkscan16A2ALW2 728 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Plekhd1B2RPU2 505 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Trim66Q924W6 1242 aa13.66□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Cct4P80315 539 aaKnown RBP13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 HellsQ60848 821 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Unc5clQ6R653 518 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Ssh1Q76I79 1042 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Znf526Q8BI66 675 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Abca15E9PWH4 1668 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Ppm1mQ8BU27 406 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Zbtb3Q91X45 518 aa13.65□□□□□ -0.22
Ddx55-201ENSMUST00000071057 Ets1P27577 440 aa13.64□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ice2Q3UZ18 988 aaKnown RBP13.64□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Bcl9lQ67FY2 1494 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Casq1O09165 405 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ssfa2Q922B9 1252 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Cyp27a1Q9DBG1 533 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Cdhr2E9Q7P9 1308 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Phactr2B1AVP0 632 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 NmiO35309 314 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Ddit3P35639 168 aa13.63□□□□□ -0.23
Ddx55-201ENSMUST00000071057 Slc7a3P70423 618 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms