RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Il1rapl2Q9ERS6 686 aa17■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ces1aE9PYP1 563 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Cnga2Q62398 664 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Smc1aQ9CU62 1233 aaKnown RBP16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Nphp3Q7TNH6 1325 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Metap2O08663 478 aaKnown RBP16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Map2k1P31938 393 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Gse1Q3U3C9 1213 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Gigyf1Q99MR1 1044 aaKnown RBP16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Sil1Q9EPK6 465 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Cacna2d4Q5RJF7 1116 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ccdc73Q8CDM4 1066 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Snw1Q9CSN1 536 aaKnown RBP16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Gm42641I6L9G2 585 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Fam160b2Q80YR2 744 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 AtripQ8BMG1 785 aa16.99■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Rad50P70388 1312 aa16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ktn1Q61595 1327 aaKnown RBP16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Cct2P80314 535 aaKnown RBP16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Znf692Q3U381 531 aa16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Slf2Q6P9P0 1278 aa16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Kiaa1524Q8BWY9 907 aa16.98■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Tbc1d8bA3KGB4 1114 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ppp1r21Q3TDD9 780 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Fbln2P37889 1221 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ddx46Q569Z5 1032 aaKnown RBP16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Farp2Q91VS8 1065 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Uchl5Q9WUP7 329 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Eif4g1Q6NZJ6 1600 aaKnown RBP16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ankrd26Q811D2 1581 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Cnnm2Q3TWN3 875 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Fam43aQ8BUP8 424 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Mmel1Q9JLI3 765 aa16.97■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Dapk3O54784 448 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Cfap157Q0VFX2 523 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Aldh8a1Q8BH00 487 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Nop53Q8BK35 484 aaKnown RBP16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 CenppQ9CZ92 286 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 ParvgQ9ERD8 331 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 KdrP35918 1367 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Gm10093D3YYI8 482 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Hdac1O09106 482 aaKnown RBP16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 DesP31001 469 aaKnown RBP16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Sh3d21Q7TSG5 549 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ccdc155Q80VJ8 648 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Ppp4r3aQ6P2K6 820 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Tbc1d7Q9D0K0 293 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Brd3Q8K2F0 726 aaKnown RBP16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Pkd2l2Q9JLG4 621 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Frmpd2A0A140LI67 1392 aa16.96■□□□□ 0.31
Pcdh20-201ENSMUST00000061628 Atp7aQ64430 1491 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Exoc8Q6PGF7 716 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ccdc112A0AUP1 442 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Clul1Q3ZRW6 464 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Zbtb22Q9Z0G7 638 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Nfxl1E9Q8I7 918 aaKnown RBP16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 GnpatP98192 678 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ifit1bl2Q3U687 466 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Gm21985Q6P6P5 1106 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Usp25P57080 1055 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Trim27Q62158 513 aa16.95■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Vps36Q91XD6 386 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Exoc5Q3TPX4 708 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ift74Q8BKE9 600 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Krt79Q8VED5 531 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 StambpQ9CQ26 424 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Mapkbp1Q6NS57 1503 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 GnaqP21279 359 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Atp8b2P98199 1209 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Kmt5bQ3U8K7 883 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 MycnP03966 462 aaKnown RBP16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Kdm4aQ8BW72 1064 aa16.94■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Tubb4bP68372 445 aaKnown RBP16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ano10Q8BH79 659 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Nsfl1cQ9CZ44 370 aaKnown RBP16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Cep135Q6P5D4 1140 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Sass6Q80UK7 654 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 GmnnO88513 206 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Zfp42P22227 288 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Fez2Q6TYB5 348 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 VeztQ3ZK22 780 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Sugp2Q8CH09 1067 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Taf7Q9R1C0 341 aa16.93■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Bbof1Q3V079 533 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Rdm1Q9CQK3 281 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Amotl1Q9D4H4 968 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Nkx1-2P42580 305 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ano2Q8CFW1 1002 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Aldh1l2Q8K009 923 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Gle1Q8R322 699 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Rbbp8nlA2ABX0 614 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Bin1O08539 588 aaKnown RBP16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Cyp7a1Q64505 503 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Ccdc122Q8BVN0 290 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 WtapQ9ER69 396 aa16.92■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Zscan29E9Q5B4 869 aa16.91■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Atp8b3Q6UQ17 1335 aa16.91■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Duxf3A0A0N4SV92 674 aa16.91■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Cbx1P83917 185 aaKnown RBP16.91■□□□□ 0.3
Pcdh20-201ENSMUST00000061628 Rbm26Q6NZN0 1012 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms