RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Taf5lQ91WQ5 589 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Med4Q9CQA5 270 aa11.72□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Rbm8a2A0A0N4SUH6 174 aa11.71□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Cnnm3Q32NY4 713 aa11.71□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Hvcn1Q3U2S8 269 aa11.71□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Rbm8aQ9CWZ3 174 aa11.71□□□□□ -0.53
Ccdc40-202ENSMUST00000053440 Ccdc155Q80VJ8 648 aa11.71□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Nup88Q8CEC0 753 aaKnown RBP11.71□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Amotl1Q9D4H4 968 aa11.71□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Mmel1Q9JLI3 765 aa11.71□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ptpn23Q6PB44 1692 aa11.71□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 MecomP14404 1042 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Mx2Q9WVP9 655 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Nphp3Q7TNH6 1325 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ddx11Q6AXC6 880 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Slc26a8Q8R0C3 999 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Chd2E9PZM4 1827 aaKnown RBP11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 PtprvP70289 1705 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 4930504O13RikQ8C5Z9 145 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Polr3dQ91WD1 398 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ak2Q9WTP6 239 aa11.7□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Bicc1Q99MQ1 977 aaKnown RBP11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Arfgef2A2A5R2 1792 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Cchcr1Q8K2I2 770 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Atg3Q9CPX6 314 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Dnajc10Q9DC23 793 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Wdr78E9PYY5 807 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ptgs1P22437 602 aa11.69□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ugt1a5B2RT14 529 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Mdm2P23804 489 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Nap1l3Q794H2 544 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Sgsm2Q80U12 1005 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ndufa8Q9DCJ5 172 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Scn7aB1AYL1 1681 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Abcc4E9Q236 1325 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Tbc1d30Q69ZT9 766 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 GckrQ91X44 587 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Spata31d1bE9QA57 1361 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Brpf3B2KF05 1204 aaKnown RBP11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 FosbP13346 338 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Hspa2P17156 633 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 MsnP26041 577 aaKnown RBP11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Usp25P57080 1055 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Gys2Q8VCB3 704 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Col1a2Q01149 1372 aa11.68□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ncbp1Q3UYV9 790 aaKnown RBP11.67□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 NaspQ99MD9 773 aaKnown RBP11.67□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 CebpzP53569 1052 aaKnown RBP11.67□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Esyt1Q3U7R1 1092 aaKnown RBP11.67□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Lmbr1lQ9D1E5 489 aa11.67□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Lmod3E9QA62 571 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Tbc1d31Q6NXY1 996 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Evi5lH3BKQ3 813 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ppfia3P60469 1194 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Irf9Q61179 399 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 PsapQ61207 557 aaKnown RBP11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Rps6ka5Q8C050 863 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Rbm42Q91V81 474 aaKnown RBP11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Neurod6P48986 337 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Bag3Q9JLV1 577 aaKnown RBP11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Igbp1bQ9QZ29 343 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Dlg5E9Q9R9 1921 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 D430041D05RikF6ZGR6 1678 aa11.66□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Gm10471E9Q1C7 252 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 EzrP26040 586 aaKnown RBP11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Grm8P47743 908 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Igfbp6P47880 238 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Kcnf1Q7TSH7 493 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 SrrtQ99MR6 875 aaKnown RBP11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 PdcQ9QW08 244 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Nfe2l3Q9WTM4 660 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Hoxa7P02830 229 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Ano8Q6PB70 1060 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 SympkQ80X82 1284 aa11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Add3Q9QYB5 706 aaKnown RBP11.65□□□□□ -0.54
Ccdc40-202ENSMUST00000053440 Kcnb2A6H8H5 907 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Zkscan7E9PVW1 718 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Eef2kO08796 724 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Leo1Q5XJE5 667 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Me3Q8BMF3 604 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 AceP09470 1312 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Lnx1O70263 728 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Dmrt2Q8BG36 561 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Iffo2Q8R2V2 512 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Grpel1Q99LP6 217 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 C5P06684 1680 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Mon2Q80TL7 1715 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Fmnl2A2APV2 1086 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Mctp1E9PV86 951 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Zfp113Q8C689 439 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 TnmdQ9EP64 317 aa11.64□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Nup153E9Q3G8 1462 aaKnown RBP11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Kif3aP28741 701 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 FanccP50652 591 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Tyro3P55144 880 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Atf7Q8R0S1 413 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Bicd2Q921C5 820 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Bloc1s2Q9CWG9 143 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Ubash3aQ3V3E1 624 aa11.63□□□□□ -0.55
Ccdc40-202ENSMUST00000053440 Pde3bQ61409 1100 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms