RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Ccdc172Q810N9 267 aa8.75□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ift74Q8BKE9 600 aa8.75□□□□□ -1.01
Usp40-201ENSMUST00000040783 Sde2Q8K1J5 448 aaKnown RBP8.75□□□□□ -1.01
Usp40-201ENSMUST00000040783 Gtpbp4Q99ME9 634 aaKnown RBP8.75□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ccdc39Q9D5Y1 937 aa8.75□□□□□ -1.01
Usp40-201ENSMUST00000040783 Pet2A2AHY8 747 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Tmem143Q8VD26 458 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 AatkQ80YE4 1365 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Col17a1Q07563 1470 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Traf3ip1Q149C2 625 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Gse1Q3U3C9 1213 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Igf2bp2Q5SF07 592 aaKnown RBP8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Hdac9Q99N13 588 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Mast1Q9R1L5 1570 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Erich3F6QRE9 1637 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Grm8P47743 908 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Nap1l2P51860 460 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Nom1Q3UFM5 854 aaKnown RBP8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Fam83gQ5SWY7 812 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Krt25Q8VCW2 446 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Fam114a1Q9D281 569 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Mrpl12Q9DB15 201 aaKnown RBP8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Card10P58660 1021 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Arglu1Q3UL36 271 aaKnown RBP8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Arhgef1Q61210 920 aaKnown RBP8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Atf7ipQ7TT18 1306 aa8.74□□□□□ -1.01
Usp40-201ENSMUST00000040783 Fmn2Q9JL04 1578 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Fam160b2Q80YR2 744 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Il1rapl2Q9ERS6 686 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 EzrP26040 586 aaKnown RBP8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Cdan1Q8CC12 1239 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Nlgn1Q99K10 843 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Cul5Q9D5V5 780 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Pola1P33609 1465 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ctr9Q62018 1173 aaKnown RBP8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ppp4r3aQ6P2K6 820 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Wdr17E9Q271 1322 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Nap1l1P28656 391 aaKnown RBP8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Lrrfip1Q3UZ39 729 aaKnown RBP8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 SelenooQ9DBC0 667 aa8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ftsj3Q9DBE9 838 aaKnown RBP8.73□□□□□ -1.01
Usp40-201ENSMUST00000040783 Il4rP16382 810 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Gjb2Q00977 226 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ncf1Q09014 390 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Atp2b3Q0VF55 1220 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Iqca1Q9CUL5 857 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Bcar3Q9QZK2 820 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Kifc2O08672 792 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Idi1P58044 227 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 HmmrQ00547 794 aaKnown RBP8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Cavin2Q63918 418 aaKnown RBP8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Cul9Q80TT8 1865 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Dhx30Q99PU8 1217 aaKnown RBP8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Tfip11Q9ERA6 838 aaKnown RBP8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Adamts12Q811B3 1600 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 InhbeO08717 350 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Eif5P59325 429 aaKnown RBP8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Igflr1Q3U4N7 345 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Lrrc45Q8CIM1 670 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Fez1Q8K0X8 392 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Ttc14Q9CSP9 761 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 TnmdQ9EP64 317 aa8.72□□□□□ -1.01
Usp40-201ENSMUST00000040783 Sh3tc1G3X9F6 1346 aa8.71□□□□□ -1.01
Usp40-201ENSMUST00000040783 TrhQ62361 256 aa8.71□□□□□ -1.01
Usp40-201ENSMUST00000040783 Lrrc59Q922Q8 307 aaKnown RBP8.71□□□□□ -1.01
Usp40-201ENSMUST00000040783 NmiO35309 314 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Znf335A2A5K6 1337 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Nphp3Q7TNH6 1325 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Nphp4P59240 1425 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Uggt2E9Q4X2 1504 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Rnf214Q8BFU3 668 aaKnown RBP8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Fam193aQ8CGI1 1231 aaKnown RBP8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Mug2P28666 1451 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Arhgef11Q68FM7 1552 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Fnbp4Q6ZQ03 1031 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Epb41l3Q9WV92 929 aa8.71□□□□□ -1.02
Usp40-201ENSMUST00000040783 Zmym4A2A791 1549 aaKnown RBP8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Armc3A2AU72 881 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ppp1r9bQ6R891 817 aaKnown RBP8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Kdm4aQ8BW72 1064 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Znf704Q9ERQ3 566 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Edc4Q3UJB9 1406 aaKnown RBP8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cul7Q8VE73 1689 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Sptbn5F6UCX4 1208 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Ca8P28651 291 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Hdgfl1Q2VPR5 283 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Esco1Q69Z69 843 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Paip2Q9D6V8 124 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Atp10aO54827 1508 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Znf697Q569E7 569 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Atp2b4Q6Q477 1205 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Pof1bQ8K4L4 587 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Olr1Q9EQ09 363 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cfap58B2RW38 873 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Taok3Q8BYC6 898 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Xrcc4Q924T3 326 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Cdca7Q9D0M2 382 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Phkg2Q9DB30 406 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Letm1Q9Z2I0 738 aa8.7□□□□□ -1.02
Usp40-201ENSMUST00000040783 Znhit6Q3UFB2 460 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms