RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Brd1E9PZ26 1189 aaKnown RBP19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Cep120Q7TSG1 988 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 ParvgQ9ERD8 331 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Tsg101Q61187 391 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Ncapg2Q6DFV1 1138 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Ythdc2B2RR83 1445 aaKnown RBP19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Eif4a2P10630 407 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Hmgb2P30681 210 aaKnown RBP19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 NsmfQ99NF2 532 aa19.2■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Gm10093D3YYI8 482 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Metap2O08663 478 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Hdac1O09106 482 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Lmbr1lQ9D1E5 489 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Smtnl1Q99LM3 459 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Amotl1Q9D4H4 968 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Mrvi1Q9WUX5 899 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Pdia3P27773 505 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Sdc2P43407 202 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Tbc1d2bQ3U0J8 965 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 TxlnaQ6PAM1 554 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rnf187Q8BFX1 236 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Mrps27Q8BK72 415 aaKnown RBP19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Taf7Q9R1C0 341 aa19.19■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Ttc5Q99LG4 440 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Grm8P47743 908 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Ppfia3P60469 1194 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Jade2Q6ZQF7 829 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Aldh8a1Q8BH00 487 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Zbtb3Q91X45 518 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Nip7Q9CXK8 180 aaKnown RBP19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Vamp4O70480 141 aa19.18■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rbm8a2A0A0N4SUH6 174 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Cdan1Q8CC12 1239 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 GckrQ91X44 587 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Gps2Q921N8 327 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rbm8aQ9CWZ3 174 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Baiap2l1Q9DBJ3 514 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Gm156Q58A37 223 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Wdr7Q920I9 1489 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Uri1Q3TLD5 531 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Cc2d1bQ8BRN9 848 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Mmel1Q9JLI3 765 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Slc14a2Q8R4T9 930 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Srgap1Q91Z69 1062 aa19.17■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Slc5a4bQ91ZP4 660 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Slx4ipQ9D7Y9 413 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Tceanc2Q8R2M0 207 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rnf34Q99KR6 376 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Krt23Q99PS0 422 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Arhgef12Q8R4H2 1543 aaKnown RBP19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Mcmdc2E9Q956 681 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Fam160b2Q80YR2 744 aa19.16■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rad50P70388 1312 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Stx8O88983 236 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Maats1Q8BRC6 783 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Ccdc191J3QQ27 883 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Gbp4Q61107 620 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Zscan29E9Q5B4 869 aa19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Rbm19Q8R3C6 952 aaKnown RBP19.15■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Gm21985Q6P6P5 1106 aa19.14■□□□□ 0.66
Ubfd1-201ENSMUST00000033158 Catsper2A2ARP9 588 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Dnajc5bQ9CQ94 199 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Olr1Q9EQ09 363 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 IncenpQ9WU62 880 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ttc21aQ8C0S4 1314 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ssh2Q5SW75 1423 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 U2af1l4Q8BGJ9 220 aa19.14■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ces1aE9PYP1 563 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Dydc1Q9D9T0 175 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Efcab2Q9CQ46 164 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 RarsQ9D0I9 660 aaKnown RBP19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Jakmip3Q5DTN8 844 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cdca8Q8BHX3 289 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cnga2Q62398 664 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Gimap5Q8BWF2 308 aa19.13■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Atp2b3Q0VF55 1220 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Kmt5bQ3U8K7 883 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cetn2Q9R1K9 172 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 PxdnQ3UQ28 1475 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Nucb1Q02819 459 aaKnown RBP19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Gimap8Q75N62 688 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Fbf1A2A870 1173 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Dapk3O54784 448 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Dnm1P39053 867 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Usp25P57080 1055 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Paxbp1P58501 919 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ddx10Q80Y44 875 aaKnown RBP19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Zc3h12cQ5DTV4 884 aa19.12■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ccdc112A0AUP1 442 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cul5Q9D5V5 780 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Disp1Q3TDN0 1521 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Pdcl2Q78Y63 240 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Larp6Q8BN59 492 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Dnajc10Q9DC23 793 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ppp4r3aQ6P2K6 820 aa19.11■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Kdm2bQ6P1G2 1309 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Cpsf1Q9EPU4 1441 aaKnown RBP19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Ccdc93Q7TQK5 629 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Aldh1l2Q8K009 923 aa19.1■□□□□ 0.65
Ubfd1-201ENSMUST00000033158 Vps16Q920Q4 839 aa19.1■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms