RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Ahnak2E9PYB0 1738 aaKnown RBP12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 ImpactO55091 318 aa12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Igfbp6P47880 238 aa12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 4930504O13RikQ8C5Z9 145 aa12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Bach1P97302 739 aa12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Bms1Q6PGF5 1284 aaKnown RBP12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Amotl1Q9D4H4 968 aa12.81□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Cbx1P83917 185 aaKnown RBP12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Slc39a6Q8C145 765 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 GckrQ91X44 587 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Fam50bQ9WTJ8 334 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Myo5bP21271 1818 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Nfat5Q9WV30 1534 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Elmsan1E9Q2I4 1089 aaKnown RBP12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Speer4f2E9Q366 295 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ercc6lQ8BHK9 1240 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gripap1Q8VD04 806 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Gtf3c6Q9D8P7 227 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Echdc1Q9D9V3 322 aa12.8□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Nol8Q3UHX0 1147 aaKnown RBP12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Mad1l1Q9WTX8 717 aaKnown RBP12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Cnksr1A2A9K7 700 aa12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 KinQ8K339 391 aa12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Cdca7lQ922M5 438 aa12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Trpm3Q5F4S9 1721 aa12.79□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Neurod6P48986 337 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ppfia3P60469 1194 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Kcna6Q61923 529 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Pdcl2Q78Y63 240 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Rapgef3Q8VCC8 918 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Kcnh5Q920E3 988 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Lmbr1lQ9D1E5 489 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ush1cQ9ES64 910 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Col18a1P39061 1774 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Adcy9P51830 1353 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Fmnl2A2APV2 1086 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Isy1Q69ZQ2 285 aaKnown RBP12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Tsr2Q8C8T8 191 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Top1mtQ8R4U6 593 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Zbtb3Q91X45 518 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Robo1O89026 1612 aa12.78□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ttll7A4Q9F0 912 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 MycnP03966 462 aaKnown RBP12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Kif4P33174 1231 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Utp18Q5SSI6 552 aaKnown RBP12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Samm50Q8BGH2 469 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Dzip1Q8BMD2 852 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Farp2Q91VS8 1065 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Bicc1Q99MQ1 977 aaKnown RBP12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Rufy3Q9D394 469 aa12.77□□□□□ -0.36
Ptcd1-201ENSMUST00000031628 Ms4a2P20490 235 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Cnnm1Q0GA42 951 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Zranb3Q6NZP1 1069 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Slc26a8Q8R0C3 999 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Gtpbp4Q99ME9 634 aaKnown RBP12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Chd1lQ9CXF7 900 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ints3Q7TPD0 1041 aaKnown RBP12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 SympkQ80X82 1284 aa12.77□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 MecomP14404 1042 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Mcm3P25206 812 aaKnown RBP12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Kcnj4P52189 445 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Atp6v1dP57746 247 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 CgnP59242 1191 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Prkab2Q6PAM0 271 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ppp1r37Q8BKR5 712 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Smc3Q9CW03 1217 aaKnown RBP12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 FosbP13346 338 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Cct4P80315 539 aaKnown RBP12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Fam228bQ497Q6 232 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Rcan3Q9JKK0 239 aa12.76□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Irf9Q61179 399 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Olfml1Q8BSH2 233 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 LratQ9JI60 231 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 PigbQ9JJQ0 542 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Mrvi1Q9WUX5 899 aaKnown RBP12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Rad50P70388 1312 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Arfgef2A2A5R2 1792 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Casc1Q6TDU8 730 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Dhx38Q80X98 1228 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 ScaperF8VQ70 1398 aaKnown RBP12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Zscan25B2RX31 543 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Smarce1O54941 411 aaKnown RBP12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Amigo3Q8C2S7 508 aa12.75□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Wnk3Q80XP9 1757 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Zfp804bA0A0G2JGH6 1343 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Erich4Q3UNU4 136 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Ifit2Q64112 472 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Tti2Q8BGV4 512 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 DpydQ8CHR6 1025 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Taf5lQ91WQ5 589 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Col1a2Q01149 1372 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Anapc15P60007 132 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Pkp1P97350 728 aaKnown RBP12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 E4f1Q8CCE9 783 aa12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Mrpl50Q8VDT9 159 aaKnown RBP12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 PtmsQ9D0J8 101 aaKnown RBP12.74□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 AppP12023 770 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Mdm2P23804 489 aa12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 PsapQ61207 557 aaKnown RBP12.73□□□□□ -0.37
Ptcd1-201ENSMUST00000031628 Polr3dQ91WD1 398 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms