RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 St5Q924W7 1134 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Cdc37l1Q9CZP7 335 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Cyp2c68K7N6C2 491 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Npy5rO70342 466 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Igfbp6P47880 238 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 PrimpolQ6P1E7 537 aa10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gnl3lQ6PGG6 577 aaKnown RBP10.32□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Btaf1E9QAE3 1848 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Cyp2c23E9Q5K4 494 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Klrk1O54709 232 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Rtkn2Q14B46 604 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Mrs2Q5NCE8 434 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Taok2Q6ZQ29 1240 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 1700019A02RikA0A087WPV9 146 aa10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Q3TQI7 289 aaKnown RBP10.31□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Rtn4Q99P72 1162 aaKnown RBP10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Stox1B2RQL2 990 aa10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 CltaO08585 235 aa10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Fkbp1aP26883 108 aaKnown RBP10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 NogP97466 232 aa10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Mapk8ip1Q9WVI9 707 aa10.3□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ttll7A4Q9F0 912 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Pdzph1Q8BGR1 1238 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Usp16Q99LG0 825 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Fam122aQ9DB52 284 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Greb1lB9EJV3 1913 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Pde4bB1AWC9 736 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gimap8Q75N62 688 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Atxn3Q9CVD2 355 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Golgb1E9PVZ8 3238 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ltn1Q6A009 1767 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 D830030K20RikE9PYQ5 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gm3043K7N693 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gm16440K7N6G6 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gm2244L7N2A3 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gm3278L7N2D2 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Gm8271L7N2E2 218 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Zc3h12cQ5DTV4 884 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Adam1aQ60813 791 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Rapgefl1Q68EF8 662 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Nop58Q6DFW4 536 aaKnown RBP10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Trim34aQ99PP6 485 aa10.29□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ankrd50F7BE84 1390 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Akap2O54931 893 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ankle2Q6P1H6 964 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Cd248Q91V98 765 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Dbndd1Q9CZ00 160 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Ttc21aQ8C0S4 1314 aa10.28□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Dctn1O08788 1281 aa10.27□□□□□ -0.76
Ssr3-201ENSMUST00000029414 Unc5clQ6R653 518 aa10.27□□□□□ -0.76
Ssr3-201ENSMUST00000029414 CrbnQ8C7D2 445 aa10.27□□□□□ -0.77
Ssr3-201ENSMUST00000029414 SafbD3YXK2 937 aaKnown RBP10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Pik3ap1Q9EQ32 811 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Cnksr1A2A9K7 700 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Fhdc1Q3ULZ2 1149 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Strip1Q8C079 837 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Flt4P35917 1363 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Slc4a2P13808 1237 aaKnown RBP10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Hspa2P17156 633 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Zbtb40Q6PCS8 1258 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Susd4Q8BH32 490 aa10.26□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Rbm25B2RY56 838 aaKnown RBP10.25□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Cct4P80315 539 aaKnown RBP10.25□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Gjd4Q8BSD4 364 aa10.25□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Spire2Q8K1S6 718 aa10.25□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Igf2rQ07113 2483 aaKnown RBP10.25□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Olfr247E9PVJ7 320 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Olfr819K7N727 320 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Hsp90ab1P11499 724 aaKnown RBP10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Thrap3Q569Z6 951 aaKnown RBP10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 CoilQ5SU73 570 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ralbp1Q62172 648 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Speer4f1Q9D5Q6 258 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Foxo3Q9WVH4 672 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Znf609Q8BZ47 1413 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Nrxn2E9Q7X7 1710 aa10.24□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Aknad1E9Q8N6 675 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Soga3Q6NZL0 945 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Atp2b4Q6Q477 1205 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Atxn2lQ7TQH0 1049 aaKnown RBP10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Mak16Q8BGS0 296 aaKnown RBP10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ptcd1Q8C2E4 695 aaKnown RBP10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 UtrnE9Q6R7 3430 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ankib1Q6ZPS6 1085 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Trpm7Q923J1 1863 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Scn9aQ62205 1984 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Atp6v0a2P15920 856 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Dpf2Q61103 391 aaKnown RBP10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Irf9Q61179 399 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Neurod2Q62414 383 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ecm29Q6PDI5 1840 aa10.23□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Pappa2E9PZ87 1789 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 AampJ3QN89 436 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 AbraQ8BUZ1 375 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Rbm5Q91YE7 815 aaKnown RBP10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ltb4r2Q9JJL9 360 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Disp3A3KFU9 1347 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Sh3tc1G3X9F6 1346 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 CfhP06909 1234 aa10.22□□□□□ -0.77
Ssr3-201ENSMUST00000029414 Ttc5Q99LG4 440 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms