RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Spef2Q8C9J3 1734 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 VgfQ0VGU4 617 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Atg3Q9CPX6 314 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Nucb1Q02819 459 aaKnown RBP9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pm20d1Q8C165 503 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Mapk8ip1Q9WVI9 707 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Adcy9P51830 1353 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Lmtk3Q5XJV6 1424 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Timm10P62073 90 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 EspnlQ3UYR4 1005 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ankrd23Q812A3 306 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ssfa2Q922B9 1252 aa9.48□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Anxa1P10107 346 aaKnown RBP9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ddx11Q6AXC6 880 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Bcl2l12Q9D3J3 255 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ubr1O70481 1757 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Pde4dQ01063 747 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Cyp7a1Q64505 503 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ginm1Q91WR6 327 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Als2Q920R0 1651 aa9.47□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ppp6r3Q922D4 844 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Mdc1Q5PSV9 1707 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ifit1bl2Q3U687 466 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Ddx46Q569Z5 1032 aaKnown RBP9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Filip1lQ6P6L0 1131 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Zbtb1Q91VL9 713 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Fam213aQ9CYH2 218 aa9.46□□□□□ -0.89
Ccdc39-201ENSMUST00000029222 Anapc15-psA0A140T8L6 141 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Catsper2A2ARP9 588 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Dctn1O08788 1281 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Casq1O09165 405 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Zbtb40Q6PCS8 1258 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Top1mtQ8R4U6 593 aa9.46□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Smarcc1P97496 1104 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 EappQ5BU09 281 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 HellsQ60848 821 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Map2P20357 1828 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Rab3gap1Q80UJ7 981 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Slx1bQ8BX32 270 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Rbm5Q91YE7 815 aaKnown RBP9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Scn4aQ9ER60 1841 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 ScaperF8VQ70 1398 aaKnown RBP9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Trim34bJ3QNR8 485 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 F2rP30558 430 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Rsph3aQ3UFY4 516 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 1700010I14RikQ7TPG0 532 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Slfnl1Q8BHW9 410 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Znf526Q8BI66 675 aa9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Msh6P54276 1358 aaKnown RBP9.45□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Pde4bB1AWC9 736 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Vps54Q5SPW0 977 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Tmem87bQ8BKU8 555 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Golim4Q8BXA1 655 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Sf3a1Q8K4Z5 791 aaKnown RBP9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Iffo2Q8R2V2 512 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Nfat5Q9WV30 1534 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Nyap1Q6PFX7 833 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Tceanc2Q8R2M0 207 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Fam84aQ9D650 292 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 MypnQ5DTJ9 1315 aa9.44□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Terf2O35144 541 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Mon2Q80TL7 1715 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 PnnO35691 725 aaKnown RBP9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ercc3P49135 783 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Emilin2Q8K482 1074 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Pnpla7A2AJ88 1352 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Cops6O88545 324 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 PogkQ80TC5 607 aa9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Dis3l2Q8CI75 870 aaKnown RBP9.43□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Rbbp8nlA2ABX0 614 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ripor2Q80U16 1078 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ppm1mQ8BU27 406 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Gm10093D3YYI8 482 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Hdac1O09106 482 aaKnown RBP9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Mdm2P23804 489 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Gsdma2Q32M21 443 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Amer1Q7TS75 1132 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Pof1bQ8K4L4 587 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Dmrtc1Q9D9R7 182 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Mlh1Q9JK91 760 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Prl3d3A0A0M6L0J6 224 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 FosbP13346 338 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Babam1Q3UI43 333 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Esco1Q69Z69 843 aa9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ptcd1Q8C2E4 695 aaKnown RBP9.42□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Sult6b1P0CC03 303 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 EvcP57680 1005 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ppfia3P60469 1194 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Tmc1Q8R4P5 757 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ncoa5Q91W39 579 aaKnown RBP9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Ltb4r2Q9JJL9 360 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Nup153E9Q3G8 1462 aaKnown RBP9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Cpa2Q504N0 417 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Tbc1d7Q9D0K0 293 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Flt4P35917 1363 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Unc5clQ6R653 518 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Trim52Q8CDV4 233 aa9.41□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Usp48Q3V0C5 1052 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Zc3h12cQ5DTV4 884 aa9.4□□□□□ -0.9
Ccdc39-201ENSMUST00000029222 Phf23Q8BSN5 401 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms