RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 AW822073A0A0N4SUK1 652 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Q3TQI7 289 aaKnown RBP13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Znf532Q6NXK2 1036 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Ifi35Q9D8C4 286 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Klra4Q60651 263 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Znf526Q8BI66 675 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Stk3Q9JI10 497 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Atp7bQ64446 1462 aa13.66□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Wdr63B2RY71 923 aa13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Wdr3Q8BHB4 942 aaKnown RBP13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Sf3a1Q8K4Z5 791 aaKnown RBP13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Fam184aE9PW83 1143 aa13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Zfp51Q3U4L8 781 aa13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Tnrc6bQ8BKI2 1810 aaKnown RBP13.65□□□□□ -0.22
Sdc1-201ENSMUST00000020911 Cfap73J3QPZ5 306 aa13.65□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Fyb1O35601 819 aa13.65□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Gabpb2P81069 414 aa13.65□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Cep135Q6P5D4 1140 aa13.65□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Zkscan3Q91VW9 553 aa13.65□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Cyp27a1Q9DBG1 533 aa13.64□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ankrd44B2RXR6 993 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Otud6bQ8K2H2 294 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Cchcr1Q8K2I2 770 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Sirt1Q923E4 737 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Evi5lH3BKQ3 813 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Frat1P70339 274 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ccz1Q8C1Y8 480 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Q8VDP2 222 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 PdiltQ9DAN1 588 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Parp14Q2EMV9 1817 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Btn2a2A4QPC6 514 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Trim55G3X8Y1 545 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Snx13Q6PHS6 957 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Pnpla2Q8BJ56 486 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 TatQ8QZR1 454 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 GzmnQ920S1 248 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Atg3Q9CPX6 314 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Zbtb22Q9Z0G7 638 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 SufuQ9Z0P7 484 aa13.63□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ctr9Q62018 1173 aaKnown RBP13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ppip5k2Q6ZQB6 1129 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Amotl2Q8K371 772 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Pmfbp1Q9WVQ0 1022 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Kif1aP33173 1695 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Abcc10Q8R4P9 1501 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Hoxc9P09633 260 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Polr3gQ6NXY9 223 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Lonp2Q9DBN5 852 aa13.62□□□□□ -0.23
Sdc1-201ENSMUST00000020911 MecomP14404 1042 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Gdap1l1Q8VE33 370 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Tbc1d4Q8BYJ6 1307 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Fmnl2A2APV2 1086 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ercc3P49135 783 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Sv2bQ8BG39 683 aa13.61□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Trim66Q924W6 1242 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Vps33aQ9D2N9 598 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Znf335A2A5K6 1337 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Sos1Q62245 1319 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Gm45015A0A140LII9 184 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Gm18336A0A140LIU8 765 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Babam1Q3UI43 333 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Fam83gQ5SWY7 812 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 NagaQ9QWR8 415 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Kif24Q6NWW5 1356 aa13.6□□□□□ -0.23
Sdc1-201ENSMUST00000020911 GnpatP98192 678 aa13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 L1td1Q587J6 782 aaKnown RBP13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Ccdc38Q8CDN8 563 aa13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Arid5bQ8BM75 1188 aaKnown RBP13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 HypkQ9CR41 129 aa13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Cdk12Q14AX6 1484 aaKnown RBP13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Fsd2Q8BZ52 692 aa13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Smarca5Q91ZW3 1051 aaKnown RBP13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 CarsQ9ER72 831 aaKnown RBP13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Gm11983V9GXS8 105 aa13.59□□□□□ -0.23
Sdc1-201ENSMUST00000020911 Mcm6P97311 821 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Rab3gap1Q80UJ7 981 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Tmx4Q8C0L0 335 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Odf2lQ9D478 642 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cep83Q9D5R3 692 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Tpm1P58771 284 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 EappQ5BU09 281 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Tbc1d30Q69ZT9 766 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cfap69Q8BH53 942 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Znf541Q0GGX2 1363 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Spef2Q8C9J3 1734 aa13.58□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Ddx17Q501J6 650 aaKnown RBP13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Cspp1B2RX88 1205 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Bcl2l13P59017 434 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Acbd5Q5XG73 508 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Nop14Q8R3N1 860 aaKnown RBP13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Dnajc10Q9DC23 793 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Ppp2r3dQ9Z176 491 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 CemipQ8BI06 1361 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Rnaseh1O70338 285 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Actn3O88990 900 aaKnown RBP13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Paxbp1P58501 919 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Trim27Q62158 513 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 Spag5Q7TME2 1165 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 NexnQ7TPW1 607 aa13.57□□□□□ -0.24
Sdc1-201ENSMUST00000020911 4930519G04RikQ9CPT7 205 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms