RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Btbd11Q6GQW0 1109 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Adam1bQ8R534 806 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Nrbp1Q99J45 535 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Nfe2l3Q9WTM4 660 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Kif20bQ80WE4 1774 aaKnown RBP12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 U2af2P26369 475 aaKnown RBP12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Arhgef1Q61210 920 aaKnown RBP12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 SrrtQ99MR6 875 aaKnown RBP12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Pes1Q9EQ61 584 aaKnown RBP12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Tbc1d8Q9Z1A9 1134 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 FancaQ9JL70 1439 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Tyro3P55144 880 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Nucb2P81117 420 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Zfp251Q6PCX8 632 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Astn2Q80Z10 1352 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Evi5lH3BKQ3 813 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Hnrnpul1Q8VDM6 859 aaKnown RBP12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ak2Q9WTP6 239 aa12.25□□□□□ -0.45
Clip3-201ENSMUST00000014065 Gm10563F6WIE4 79 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Mdm2P23804 489 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Zhx1P70121 873 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ccdc155Q80VJ8 648 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Igbp1bQ9QZ29 343 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ercc6l2Q9JIM3 1537 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Usp32F8VPZ3 1604 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 AppP12023 770 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Gsdma3Q5Y4Y6 464 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 TatQ8QZR1 454 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Nop14Q8R3N1 860 aaKnown RBP12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Wdr33Q8K4P0 1330 aaKnown RBP12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Hoxc9P09633 260 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Cdkn1cP49919 348 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Tbc1d31Q6NXY1 996 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 Zbtb3Q91X45 518 aa12.24□□□□□ -0.45
Clip3-201ENSMUST00000014065 PtpruB1AUH1 1446 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Chd4Q6PDQ2 1915 aaKnown RBP12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Oas2E9Q9A9 742 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Atf5O70191 283 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Kcnf1Q7TSH7 493 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Frmpd2A0A140LI67 1392 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Atp2b3Q0VF55 1220 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Rnf20Q5DTM8 973 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 4930504O13RikQ8C5Z9 145 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Krt85Q9Z2T6 507 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Nphp3Q7TNH6 1325 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Spata31d1bE9QA57 1361 aa12.23□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ubash3aQ3V3E1 624 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Psma5Q9Z2U1 241 aaKnown RBP12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Spef2Q8C9J3 1734 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Pde3bQ61409 1100 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 ZwintQ9CQU5 252 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Cnpy2Q9QXT0 182 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Parp14Q2EMV9 1817 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ugt1a5B2RT14 529 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Lnx1O70263 728 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Bend3Q6PAL0 825 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Hook1Q8BIL5 728 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Me3Q8BMF3 604 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Echdc1Q9D9V3 322 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Kif13aQ9EQW7 1749 aa12.22□□□□□ -0.45
Clip3-201ENSMUST00000014065 Slc35g1Q8BY79 368 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Cep57l1Q8VDS7 400 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Taf5lQ91WQ5 589 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ccer1Q9CQL2 403 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Bloc1s2Q9CWG9 143 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Bag3Q9JLV1 577 aaKnown RBP12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 CltcQ68FD5 1675 aaKnown RBP12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Card6E9PWH2 1175 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ercc3P49135 783 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 TrhQ62361 256 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 R3hcc1Q8BSI6 488 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 Irx4Q9QY61 515 aa12.21□□□□□ -0.45
Clip3-201ENSMUST00000014065 CoilQ5SU73 570 aa12.21□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ppp6r1Q7TSI3 856 aa12.21□□□□□ -0.46
Clip3-201ENSMUST00000014065 Sgsm2Q80U12 1005 aa12.21□□□□□ -0.46
Clip3-201ENSMUST00000014065 Hmgn5Q9JL35 406 aa12.21□□□□□ -0.46
Clip3-201ENSMUST00000014065 Add3Q9QYB5 706 aaKnown RBP12.21□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ifit1Q64282 463 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Kank4Q6P9J5 1016 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Itsn1Q9Z0R4 1714 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cct2P80314 535 aaKnown RBP12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Cfap157Q0VFX2 523 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Leo1Q5XJE5 667 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Kiaa0753Q6A000 959 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Bicc1Q99MQ1 977 aaKnown RBP12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 TimelessQ9R1X4 1197 aa12.2□□□□□ -0.46
Clip3-201ENSMUST00000014065 Eif4a1P60843 406 aaKnown RBP12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Fam228bQ497Q6 232 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Oxsr1Q6P9R2 527 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Atf7Q8R0S1 413 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Lmbr1lQ9D1E5 489 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Add2Q9QYB8 725 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ccdc162pQ0VG85 912 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Taf3Q5HZG4 932 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Q8C5K5 320 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Irgm2A0A140LIF8 407 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Tpm3P21107 285 aaKnown RBP12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Ano1Q8BHY3 960 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Syt10Q9R0N4 523 aa12.19□□□□□ -0.46
Clip3-201ENSMUST00000014065 Gemin5Q8BX17 1502 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms