RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Topaz1E5FYH1 1653 aa20.2■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Ercc6lQ8BHK9 1240 aa20.2■□□□□ 0.82
Ctcf-201ENSMUST00000005841 EappQ5BU09 281 aa20.2■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Ap5z1Q3U829 807 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Abcc10Q8R4P9 1501 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Wnk3Q80XP9 1757 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Fam53cQ8BXQ8 393 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Nrbp1Q99J45 535 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Gjb2Q00977 226 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Sv2bQ8BG39 683 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Aox4Q3TYQ9 1336 aa20.19■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Arid3cA6PWV5 409 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Dmrt2Q8BG36 561 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Tti2Q8BGV4 512 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Stk31Q99MW1 1018 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Evi5lH3BKQ3 813 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Znf335A2A5K6 1337 aa20.18■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Atp8b3Q6UQ17 1335 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 TmpoQ61033 693 aaKnown RBP20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Sgsm2Q80U12 1005 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Ubxn10Q8BG34 277 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Cyp2d12Q8BVD2 504 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 IghaA0A0A6YXW6 389 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Tmem109Q3UBX0 243 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Cchcr1Q8K2I2 770 aa20.17■□□□□ 0.82
Ctcf-201ENSMUST00000005841 TfrcQ62351 763 aaKnown RBP20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Ube2oQ6ZPJ3 1288 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 TimelessQ9R1X4 1197 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 CatipB9EKE5 520 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 PdcQ9QW08 244 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Cdkn1cP49919 348 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Leo1Q5XJE5 667 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Nup88Q8CEC0 753 aaKnown RBP20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Pof1bQ8K4L4 587 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Sirt1Q923E4 737 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Aox1O54754 1333 aa20.16■□□□□ 0.82
Ctcf-201ENSMUST00000005841 MpripP97434 1024 aa20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Fam228bQ497Q6 232 aa20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Mrpl50Q8VDT9 159 aaKnown RBP20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Tyro3P55144 880 aa20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Nop14Q8R3N1 860 aaKnown RBP20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Nol12Q8BG17 217 aa20.15■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Wdr33Q8K4P0 1330 aaKnown RBP20.14■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Capn2O08529 700 aa20.14■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Fam114a1Q9D281 569 aa20.14■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Utp3Q9JI13 469 aaKnown RBP20.14■□□□□ 0.82
Ctcf-201ENSMUST00000005841 Ggnbp2Q5SV77 696 aa20.14■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Gtpbp4Q99ME9 634 aaKnown RBP20.14■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Kiaa0232Q80U59 1396 aaKnown RBP20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Ier5O89113 308 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Surf1P09925 306 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Pkp1P97350 728 aaKnown RBP20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Zfp397Q7TNK4 527 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Nid2O88322 1403 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Zhx1P70121 873 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Casc1Q6TDU8 730 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Snap23O09044 210 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Esyt1Q3U7R1 1092 aaKnown RBP20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Dnaaf2Q8BPI1 814 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Spata32Q8C5V0 334 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 4930548H24RikQ9D496 437 aa20.13■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Cdca7lQ922M5 438 aa20.12■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Zkscan5Q9Z1D8 819 aa20.12■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Atp10bB1AWN4 1474 aa20.12■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Pcdhgc5Q91XW9 944 aa20.12■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Tshz1Q5DTH5 1084 aa20.11■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Gm11983V9GXS8 105 aa20.11■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Asxl2Q8BZ32 1370 aa20.11■□□□□ 0.81
Ctcf-201ENSMUST00000005841 RubcnlQ3TD16 648 aa20.11■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Cwc27Q3TKY6 469 aa20.11■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Gli3Q61602 1583 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Gm973E9Q295 1059 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Ifit2Q64112 472 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Ndufa8Q9DCJ5 172 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Mybbp1aQ7TPV4 1344 aaKnown RBP20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Taf5lQ91WQ5 589 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Sh3bp1P55194 680 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Zbtb22Q9Z0G7 638 aa20.1■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Phf20l1Q8CCJ9 1013 aa20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Fbxl16A2RT62 479 aa20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Tjp1P39447 1745 aaKnown RBP20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Rreb1Q3UH06 1700 aaKnown RBP20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 RbsnQ80Y56 783 aa20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Atg3Q9CPX6 314 aa20.09■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Cspp1B2RX88 1205 aa20.08■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Lrrc8aQ80WG5 810 aa20.08■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Ints4Q8CIM8 964 aa20.08■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Smc3Q9CW03 1217 aaKnown RBP20.08■□□□□ 0.81
Ctcf-201ENSMUST00000005841 Cct4P80315 539 aaKnown RBP20.08■□□□□ 0.8
Ctcf-201ENSMUST00000005841 CoilQ5SU73 570 aa20.08■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Ppfia1B2RXQ2 1266 aa20.07■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Trim30aP15533 496 aa20.07■□□□□ 0.8
Ctcf-201ENSMUST00000005841 MpndQ3TV65 487 aa20.07■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Plcd1Q8R3B1 756 aa20.07■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Prdm4Q80V63 803 aa20.07■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Tlr7P58681 1050 aa20.06■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Anks1aP59672 1150 aa20.06■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Fez2Q6TYB5 348 aa20.06■□□□□ 0.8
Ctcf-201ENSMUST00000005841 Abcc4E9Q236 1325 aa20.06■□□□□ 0.8
Ctcf-201ENSMUST00000005841 H2afxP27661 143 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms