RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Trim30aP15533 496 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 U2surpQ6NV83 1029 aaKnown RBP14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Fez2Q6TYB5 348 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Add3Q9QYB5 706 aaKnown RBP14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Zkscan7E9PVW1 718 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 RdxP26043 583 aaKnown RBP14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cpa2Q504N0 417 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Idi2Q8BFZ6 227 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Pmfbp1Q9WVQ0 1022 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Stk36Q69ZM6 1316 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Atp8b2P98199 1209 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Stx6Q9JKK1 255 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Oas2E9Q9A9 742 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 InhbeO08717 350 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 MpndQ3TV65 487 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Prune1Q8BIW1 454 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Bmp2kQ91Z96 1138 aa14.42□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Igsf1Q7TQA1 1317 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Stac3Q8BZ71 360 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Klhdc4Q921I2 584 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Gtpbp4Q99ME9 634 aaKnown RBP14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Stk31Q99MW1 1018 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Igbp1bQ9QZ29 343 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 CemipQ8BI06 1361 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Rad50P70388 1312 aa14.41□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Abca15E9PWH4 1668 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Nxf2Q4ZGD8 691 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Creld2Q9CYA0 350 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Psrc1Q9D0P7 329 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Utp3Q9JI13 469 aaKnown RBP14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cdhr2E9Q7P9 1308 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Nphp3Q7TNH6 1325 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Mcmdc2E9Q956 681 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Hmox1P14901 289 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Usp25P57080 1055 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Samm50Q8BGH2 469 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Serpina10Q8R121 448 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Slx4ipQ9D7Y9 413 aa14.4□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Hsp90b1P08113 802 aaKnown RBP14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Nup88Q8CEC0 753 aaKnown RBP14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Wdr24Q8CFJ9 790 aa14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Txnrd1Q9JMH6 613 aa14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Zfp804bA0A0G2JGH6 1343 aa14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Wdr33Q8K4P0 1330 aaKnown RBP14.39□□□□□ -0.11
Ufd1-201ENSMUST00000005394 U2af2P26369 475 aaKnown RBP14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Bms1Q6PGF5 1284 aaKnown RBP14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Cchcr1Q8K2I2 770 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Ppp1r42Q8R1Z4 357 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Ifi35Q9D8C4 286 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Hmgn5Q9JL35 406 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Add2Q9QYB8 725 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Spata31d1bE9QA57 1361 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Msh6P54276 1358 aaKnown RBP14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Birc3O08863 600 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Srgap3Q812A2 1099 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Dzip1Q8BMD2 852 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Sf3a1Q8K4Z5 791 aaKnown RBP14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Ddx41Q91VN6 622 aaKnown RBP14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Vps33aQ9D2N9 598 aa14.38□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Atp8b3Q6UQ17 1335 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Col16a1Q8BLX7 1580 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Tpd52l1O54818 204 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Mcm10Q0VBD2 885 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Jakmip1Q8BVL9 626 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Cc2d1aQ8K1A6 943 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 ZgpatQ8VDM1 511 aa14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Smc3Q9CW03 1217 aaKnown RBP14.37□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Syt1P46096 421 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Kiaa0754Q69ZZ9 979 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Sv2bQ8BG39 683 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Ercc6lQ8BHK9 1240 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 DpydQ8CHR6 1025 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Rufy3Q9D394 469 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 FancaQ9JL70 1439 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Brpf3B2KF05 1204 aaKnown RBP14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 HdgfP51859 237 aaKnown RBP14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Tshz1Q5DTH5 1084 aa14.36□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Pcmtd1P59913 357 aa14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Gjb2Q00977 226 aa14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Unc5clQ6R653 518 aa14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Tshz3Q8CGV9 1081 aa14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 SnrkQ8VDU5 748 aa14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Chd4Q6PDQ2 1915 aaKnown RBP14.35□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Zscan29E9Q5B4 869 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 CalcaP70160 136 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Taf3Q5HZG4 932 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Snx13Q6PHS6 957 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Sgsm1Q8BPQ7 1093 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Fam114a1Q9D281 569 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Zkscan5Q9Z1D8 819 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Myo5bP21271 1818 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Tpx2A2APB8 745 aaKnown RBP14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Eif4a2P10630 407 aa14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Sf3b2Q3UJB0 878 aaKnown RBP14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Mybbp1aQ7TPV4 1344 aaKnown RBP14.34□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Trpm3Q5F4S9 1721 aa14.33□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Arfgef2A2A5R2 1792 aa14.33□□□□□ -0.11
Ufd1-201ENSMUST00000005394 Hmx1O70218 332 aa14.33□□□□□ -0.12
Ufd1-201ENSMUST00000005394 Mcm3P25206 812 aaKnown RBP14.33□□□□□ -0.12
Ufd1-201ENSMUST00000005394 CebpzP53569 1052 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms