RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Ftsj3Q9DBE9 838 aaKnown RBP15.42■□□□□ 0.06
Traf6-201ENSMUST00000004949 F2rP30558 430 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Znf653Q6YND2 615 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Map7d2A2AG50 781 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Mcm3P25206 812 aaKnown RBP15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Slc13a4Q8BZ82 625 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Pola1P33609 1465 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Pram1Q6BCL1 675 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Dph6Q9CQ28 267 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 LratQ9JI60 231 aa15.41■□□□□ 0.06
Traf6-201ENSMUST00000004949 Nkx1-2P42580 305 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 RtcbQ99LF4 505 aaKnown RBP15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Atp8b2P98199 1209 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Sil1Q9EPK6 465 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Peg3Q3URU2 1571 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Ccdc66Q6NS45 935 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Hs1bp3Q3TC93 395 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Lmbr1Q9JIT0 490 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Homer1Q9Z2Y3 366 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Abcd1P48410 736 aa15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Larp1Q6ZQ58 1072 aaKnown RBP15.4■□□□□ 0.06
Traf6-201ENSMUST00000004949 Rnf41Q8BH75 317 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Sde2Q8K1J5 448 aaKnown RBP15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 NmiO35309 314 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Rab3gap1Q80UJ7 981 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 AU019823E9PUQ3 292 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Kdm5cP41230 1554 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Hoxa7P02830 229 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Myl6bQ8CI43 207 aa15.39■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ppfia1B2RXQ2 1266 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 CpvlQ9D3S9 478 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Znf287Q9EQB9 759 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Phlpp2Q8BXA7 1320 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Slc4a4O88343 1079 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Adam1aQ60813 791 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Cpsf1Q9EPU4 1441 aaKnown RBP15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ssr1Q9CY50 286 aaKnown RBP15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Efcab6Q6P1E8 1516 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Pbrm1Q8BSQ9 1634 aaKnown RBP15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Mrvi1Q9WUX5 899 aaKnown RBP15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Pmfbp1Q9WVQ0 1022 aa15.38■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ncf1Q09014 390 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Frmd3Q8BHD4 595 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ift74Q8BKE9 600 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ufl1Q8CCJ3 793 aaKnown RBP15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 DymQ8CHY3 669 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Med4Q9CQA5 270 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 SetQ9EQU5 289 aaKnown RBP15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Skint5A7XUY5 1461 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Limch1Q3UH68 1057 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Triml1Q8BVP1 470 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Lamb3Q61087 1168 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Atf7Q8R0S1 413 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Usp5P56399 858 aaKnown RBP15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Tmem266Q8BZB3 538 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 GlmnQ8BZM1 596 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Dydc2Q9D3X8 139 aa15.37■□□□□ 0.05
Traf6-201ENSMUST00000004949 Secisbp2lQ6A098 1086 aaKnown RBP15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Slc4a8Q8JZR6 1089 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Q9D5Q8 446 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Myl3P09542 204 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Traf3ip1Q149C2 625 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Cnot6lQ8VEG6 555 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 MthfsQ9D110 203 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Atf7ipQ7TT18 1306 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 IbspQ61711 324 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Prm3Q62100 101 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ccdc172Q810N9 267 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Rrbp1Q99PL5 1605 aaKnown RBP15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ccdc85cE9Q6B2 420 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Metap2O08663 478 aaKnown RBP15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Rbm8a2A0A0N4SUH6 174 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Rbm8aQ9CWZ3 174 aa15.36■□□□□ 0.05
Traf6-201ENSMUST00000004949 Fmn2Q9JL04 1578 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Abtb2Q7TQI7 1024 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Slc1a4O35874 532 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ttc12Q8BW49 704 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Bin1O08539 588 aaKnown RBP15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Clcn1Q64347 994 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Rufy1Q8BIJ7 712 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Tbc1d8Q9Z1A9 1134 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Mcmdc2E9Q956 681 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ier5O89113 308 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 MpndQ3TV65 487 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Mctp2Q5RJH2 878 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Fam160b2Q80YR2 744 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Gnl2Q99LH1 728 aaKnown RBP15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Phkg2Q9DB30 406 aa15.35■□□□□ 0.05
Traf6-201ENSMUST00000004949 Hmgb2P30681 210 aaKnown RBP15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Esco1Q69Z69 843 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Kdm3aQ6PCM1 1323 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Pla2g4fQ50L41 855 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Eme2Q56A04 373 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Nop14Q8R3N1 860 aaKnown RBP15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Depdc5P61460 1591 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Plekhg2Q6KAU7 1340 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ankrd50F7BE84 1390 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Trim11Q99PQ2 467 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ccdc34Q3UI66 367 aa15.34■□□□□ 0.05
Traf6-201ENSMUST00000004949 Ginm1Q91WR6 327 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms