RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 SympkQ80X82 1284 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Ccar2Q8VDP4 922 aaKnown RBP19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 Col15a1O35206 1367 aa19.75■□□□□ 0.75
Shh-201ENSMUST00000002708 MlecQ6ZQI3 291 aaKnown RBP19.74■□□□□ 0.75
Shh-201ENSMUST00000002708 KinQ8K339 391 aa19.74■□□□□ 0.75
Shh-201ENSMUST00000002708 Rufy3Q9D394 469 aa19.74■□□□□ 0.75
Shh-201ENSMUST00000002708 Mcm3P25206 812 aaKnown RBP19.74■□□□□ 0.75
Shh-201ENSMUST00000002708 Atp6v1dP57746 247 aa19.74■□□□□ 0.75
Shh-201ENSMUST00000002708 Gli3Q61602 1583 aa19.73■□□□□ 0.75
Shh-201ENSMUST00000002708 Ddx17Q501J6 650 aaKnown RBP19.73■□□□□ 0.75
Shh-201ENSMUST00000002708 Pdzd9Q9D9M4 266 aa19.73■□□□□ 0.75
Shh-201ENSMUST00000002708 Irf9Q61179 399 aa19.73■□□□□ 0.75
Shh-201ENSMUST00000002708 Ccdc7Q9D541 371 aa19.72■□□□□ 0.75
Shh-201ENSMUST00000002708 Flt4P35917 1363 aa19.72■□□□□ 0.75
Shh-201ENSMUST00000002708 Farp2Q91VS8 1065 aa19.72■□□□□ 0.75
Shh-201ENSMUST00000002708 Anp32cQ64G17 123 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Tmem119Q8R138 280 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Brpf1B2RRD7 1212 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Igfbp6P47880 238 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Bach2P97303 839 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Casc1Q6TDU8 730 aa19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 Edc3Q8K2D3 508 aaKnown RBP19.71■□□□□ 0.75
Shh-201ENSMUST00000002708 OptnQ8K3K8 584 aa19.71■□□□□ 0.74
Shh-201ENSMUST00000002708 Taf7Q9R1C0 341 aa19.71■□□□□ 0.74
Shh-201ENSMUST00000002708 Rad50P70388 1312 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Dixdc1Q80Y83 711 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Zbtb3Q91X45 518 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Simc1E9Q6E9 1354 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Pcdh10E9PXQ7 1057 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Hoxa7P02830 229 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Usp48Q3V0C5 1052 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Fam228bQ497Q6 232 aa19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Ints3Q7TPD0 1041 aaKnown RBP19.7■□□□□ 0.74
Shh-201ENSMUST00000002708 Smarce1O54941 411 aaKnown RBP19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 Adcy5P84309 1262 aa19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 ThemisQ8BGW0 636 aa19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 TkfcQ8VC30 578 aa19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 Bicc1Q99MQ1 977 aaKnown RBP19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 Glipr1l2Q9CQ35 332 aa19.69■□□□□ 0.74
Shh-201ENSMUST00000002708 Tceanc2Q8R2M0 207 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Taf5lQ91WQ5 589 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Pdia6Q922R8 440 aaKnown RBP19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Stx6Q9JKK1 255 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Abcc4E9Q236 1325 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Gm21698A0A087WQP8 267 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Gm21671G3UY31 267 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Ets1P27577 440 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Strn4P58404 760 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Serpina10Q8R121 448 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Cdca7lQ922M5 438 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Lmbr1lQ9D1E5 489 aa19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Mad1l1Q9WTX8 717 aaKnown RBP19.68■□□□□ 0.74
Shh-201ENSMUST00000002708 Hspa2P17156 633 aa19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Chmp7Q8R1T1 451 aa19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Eif3aP23116 1344 aaKnown RBP19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Cd22P35329 862 aa19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Grm8P47743 908 aa19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Ddx19aQ61655 478 aaKnown RBP19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Utp3Q9JI13 469 aaKnown RBP19.67■□□□□ 0.74
Shh-201ENSMUST00000002708 Jarid2Q62315 1234 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Zranb3Q6NZP1 1069 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Smc3Q9CW03 1217 aaKnown RBP19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Fam50bQ9WTJ8 334 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Syt1P46096 421 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 CrklP47941 303 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Zfp51Q3U4L8 781 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Wdr93Q402B2 695 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Zscan22Q8BGS5 496 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Tsr2Q8C8T8 191 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 Top1mtQ8R4U6 593 aa19.66■□□□□ 0.74
Shh-201ENSMUST00000002708 HellsQ60848 821 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Gys2Q8VCB3 704 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Mx2Q9WVP9 655 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Ttll7A4Q9F0 912 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Ythdc1E9Q5K9 736 aaKnown RBP19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Kcna6Q61923 529 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Tti2Q8BGV4 512 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Phkg2Q9DB30 406 aa19.65■□□□□ 0.74
Shh-201ENSMUST00000002708 Cnnm1Q0GA42 951 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Ccdc178Q8CDV0 866 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Nrxn3Q6P9K9 1571 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Ppfia1B2RXQ2 1266 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Prkab2Q6PAM0 271 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Mrpl50Q8VDT9 159 aaKnown RBP19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 Chrna2Q91X60 512 aa19.64■□□□□ 0.73
Shh-201ENSMUST00000002708 NcapgE9PWG6 1004 aa19.63■□□□□ 0.73
Shh-201ENSMUST00000002708 Cavin1O54724 392 aa19.63■□□□□ 0.73
Shh-201ENSMUST00000002708 Pkp1P97350 728 aaKnown RBP19.63■□□□□ 0.73
Shh-201ENSMUST00000002708 Wdr24Q8CFJ9 790 aa19.63■□□□□ 0.73
Shh-201ENSMUST00000002708 Iqsec3Q3TES0 1195 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Tbc1d30Q69ZT9 766 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Slc39a6Q8C145 765 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Il1rapl2Q9ERS6 686 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Add2Q9QYB8 725 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 PigbQ9JJQ0 542 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Ddx60E9PZQ1 1711 aa19.62■□□□□ 0.73
Shh-201ENSMUST00000002708 Ifit2Q64112 472 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Snx13Q6PHS6 957 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Ppm1mQ8BU27 406 aa19.61■□□□□ 0.73
Shh-201ENSMUST00000002708 Kiaa0232Q80U59 1396 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms