RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Polr3dQ91WD1 398 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ttc21aQ8C0S4 1314 aa10.51□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Igf2bp2Q5SF07 592 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cavin2Q63918 418 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Uso1Q9Z1Z0 959 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Stat1P42225 749 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ano10Q8BH79 659 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Clip2Q9Z0H8 1047 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ppfia1B2RXQ2 1266 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Fermt2Q8CIB5 680 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ces1hD3Z298 562 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Adcy5P84309 1262 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cep135Q6P5D4 1140 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Mrps27Q8BK72 415 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Pym1Q8CHP5 203 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rrs1Q9CYH6 365 aaKnown RBP10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Echdc1Q9D9V3 322 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Plekho1Q9JIY0 408 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rfx7F8VPJ6 1459 aa10.5□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Frmd3Q8BHD4 595 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ddx54Q8K4L0 874 aaKnown RBP10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Urb2E9Q7L1 1524 aaKnown RBP10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ankrd44B2RXR6 993 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 GpkowQ56A08 488 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Krt15Q61414 452 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Egfem1Q8C088 590 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Gng11P61953 73 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Nup133Q8R0G9 1155 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Sdccag8Q80UF4 717 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ift74Q8BKE9 600 aa10.49□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Opa1P58281 960 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 4921530L21RikQ9CQ47 274 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 TnikP83510 1323 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Sycp2lA0A0M3U1B0 842 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Map3k13Q1HKZ5 959 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ctnnbl1Q9CWL8 563 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Syce1Q9D495 329 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 AdnpQ9Z103 1108 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ubap1lG3UW59 384 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Diaph1O08808 1255 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Specc1Q5SXY1 1067 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Haus2Q9CQS9 234 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 PogzQ8BZH4 1409 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rad50P70388 1312 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Gm28919A0A087WP35 240 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Speer4aF8VPX6 267 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Terf2O35144 541 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 EvcP57680 1005 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Map3k9Q3U1V8 1077 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 P4ha1Q60715 534 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Fam160b2Q80YR2 744 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Nol11Q8BJW5 723 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ccdc12Q8R344 166 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Rai14Q9EP71 979 aaKnown RBP10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Mroh2bQ7M6Y6 1581 aa10.48□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Atp8b3Q6UQ17 1335 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Q3UJC8 639 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Prpf40aQ9R1C7 953 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cdr1E9Q0B4 517 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Dapk3O54784 448 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ift88Q61371 824 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cep120Q7TSG1 988 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Afap1Q80YS6 731 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Yeats4Q9CR11 227 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tacc3Q9JJ11 631 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Mmel1Q9JLI3 765 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Nfxl1E9Q8I7 918 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Calm1P0DP26 149 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Calm2P0DP27 149 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Calm3P0DP28 149 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tnnc1P19123 161 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Scaf1Q5U4C3 1256 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Krt25Q8VCW2 446 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Tnip1Q9WUU8 647 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Dhx9O70133 1380 aaKnown RBP10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Caskin1Q6P9K8 1431 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cbfa2t2O70374 594 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Kmt5bQ3U8K7 883 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Dzip1lQ499E4 774 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Slc38a10Q5I012 1090 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Irf9Q61179 399 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Idi2Q8BFZ6 227 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 RalylQ8BTF8 293 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Slc5a1Q8C3K6 665 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Lman1Q9D0F3 517 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Epb41l3Q9WV92 929 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Pde3aQ9Z0X4 1141 aa10.47□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Metap2O08663 478 aaKnown RBP10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ube3aO08759 870 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Mcm3P25206 812 aaKnown RBP10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ssrp1Q08943 708 aaKnown RBP10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Spa17Q62252 149 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Hip1rQ9JKY5 1068 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Cbx1P83917 185 aaKnown RBP10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Q3UPC7 1272 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Ccdc66Q6NS45 935 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Nap1l4Q78ZA7 375 aaKnown RBP10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Dclk3Q8BWQ5 790 aa10.46□□□□□ -0.73
Ccdc47-201ENSMUST00000002043 Fam114a1Q9D281 569 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms