RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 HOXD1Q9GZZ0 328 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 LHX9Q9NQ69 397 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TEX10Q9NXF1 929 aaPredicted RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 NDOR1Q9UHB4 597 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 H3BQ06 376 aaPredicted RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 M0R3H8 397 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 PDE9AO76083 593 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 FGF19O95750 216 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 ADRB3P13945 408 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 PSMA1P25786 263 aaKnown RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 ITGB7P26010 798 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TIE1P35590 1138 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 BCL2A1Q16548 175 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 FNDC3BQ53EP0 1204 aaKnown RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 ZMAT1Q5H9K5 638 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 GRASPQ7Z6J2 395 aaPredicted RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 DCUN1D3Q8IWE4 304 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 AMER3Q8N944 861 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 Q8N9G6 341 aaPredicted RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 OR8J1Q8NGP2 316 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 GPR151Q8TDV0 419 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 XAGE5Q8WWM1 108 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 DHRS1Q96LJ7 313 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TREX2Q9BQ50 279 aaPredicted RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 AIF1LQ9BQI0 150 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 CCDC32Q9BV29 185 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 MND1Q9BWT6 205 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 RHBGQ9H310 441 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TPK1Q9H3S4 243 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 DYRK4Q9NR20 520 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TM7SF3Q9NS93 570 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 KLHL3Q9UH77 587 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 TBC1D24Q9ULP9 559 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 RPL36Q9Y3U8 105 aaKnown RBP10.67□□□□□ -0.7
VARS2-213ENST00000625423 PLXND1Q9Y4D7 1925 aa10.67□□□□□ -0.7
VARS2-213ENST00000625423 WASHC1A8K0Z3 465 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TLX2O43763 284 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 SEMA3DO95025 777 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 RCVRNP35243 200 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■■■□ 22.2
VARS2-213ENST00000625423 SF3B4Q15427 424 aaKnown RBP eCLIP10.66□□□□□ -0.74e-7■■■□□ 18.3
VARS2-213ENST00000625423 C9orf64Q5T6V5 341 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 MFSD4BQ5TF39 518 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 LIPKQ5VXJ0 399 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TMC5Q6UXY8 1006 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ZNF765Q7L2R6 523 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 KRT73Q86Y46 540 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 SLC7A5P1Q8MH63 180 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 NANOGP1Q8N7R0 232 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 FLCNQ8NFG4 579 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TEFMQ96QE5 360 aaKnown RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 CTRCQ99895 268 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 C3orf14Q9HBI5 128 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 VEGFDO43915 354 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 PRKYO43930 277 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 NME6O75414 186 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 UGT2B17O75795 530 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 SLITRK5O94991 958 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TP53P04637 393 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 CLTBP09497 229 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 CEBPBP17676 345 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 SLC6A11P48066 632 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 MXD1Q05195 221 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 DPTQ07507 201 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ZNF362Q5T0B9 420 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 PODNL1Q6PEZ8 512 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 AMZ2Q86W34 360 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 LAX1Q8IWV1 398 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ST13P5Q8NFI4 369 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 ASB15Q8WXK1 588 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ZBED6CLQ96FA7 236 aaPredicted RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 OR51I1Q9H343 314 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 KCNK12Q9HB15 430 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 SEC14L4Q9UDX3 406 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 MUTYHQ9UIF7 546 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 PPM1DO15297 605 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TBX19O60806 448 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 CCNKO75909 580 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 SERPIND1P05546 499 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ENDOUP21128 410 aaKnown RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 PTGER1P34995 402 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 GSTM5P46439 218 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 RORCP51449 518 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 MRPL43Q8N983 215 aaKnown RBP10.66□□□□□ -0.7
VARS2-213ENST00000625423 OR8D1Q8WZ84 308 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 OR2A14Q96R47 310 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 FUZQ9BT04 418 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 PELI2Q9HAT8 420 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 CTPS2Q9NRF8 586 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 TRPC4Q9UBN4 977 aa10.66□□□□□ -0.7
VARS2-213ENST00000625423 ACAD8Q9UKU7 415 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms