RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 DACT3Q96B18 629 aaPredicted RBP12.4□□□□□ -0.42
CHD1L-210ENST00000622533 MTERF1Q99551 399 aaKnown RBP12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ATG10Q9H0Y0 220 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 TMEM38AQ9H6F2 299 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ERVMER34-1Q9H9K5 563 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 PROM1O43490 865 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 PCDH7O60245 1069 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 GASTP01350 101 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 IDSP22304 550 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ITGB7P26010 798 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 CRATP43155 626 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 INPP1P49441 399 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 GATMP50440 423 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 PTSQ03393 145 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 DOC2AQ14183 400 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 MPP7Q5T2T1 576 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ARSKQ6UWY0 536 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 TRIM69Q86WT6 500 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 RASGRP3Q8IV61 690 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 OXR1Q8N573 874 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 DUSP18Q8NEJ0 188 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 OR52N2Q8NGI0 321 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 OR52P1PQ8NH57 321 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ECHDC3Q96DC8 303 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 NELL2Q99435 816 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 TCF25Q9BQ70 676 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 MARVELD1Q9BSK0 173 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 SUV39H2Q9H5I1 410 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 BRD9Q9H8M2 597 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ANKRA2Q9H9E1 313 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 SGK2Q9HBY8 427 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
CHD1L-210ENST00000622533 ATP6V1HQ9UI12 483 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 AUP1Q9Y679 476 aa12.4□□□□□ -0.42
CHD1L-210ENST00000622533 NUPL2O15504 423 aaKnown RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SERPINI2O75830 405 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 NCR1O76036 304 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 PIPP12273 146 aaPredicted RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 DDX39BQ13838 428 aaKnown RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SNAPC1Q16533 368 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 GARNL3Q5VVW2 1013 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 TRIM40Q6P9F5 258 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 LIPIQ6XZB0 460 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 GDPGP1Q6ZNW5 385 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 PRSS42Q7Z5A4 293 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 VRK3Q8IV63 474 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 C1orf52Q8N6N3 182 aaKnown RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 PIP5K1AQ99755 562 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 KATNB1Q9BVA0 655 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 LIN7BQ9HAP6 207 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 RRAGCQ9HB90 399 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 ZC4H2Q9NQZ6 224 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SH3BP4Q9P0V3 963 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 APOL3O95236 402 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 RAF1P04049 648 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SELPP16109 830 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 CD22P20273 847 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 HOXD10P28358 340 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SPINT3P49223 89 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 HMGA2P52926 109 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 GAB1Q13480 694 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SCARB2Q14108 478 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 ZNF628Q5EBL2 1059 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 USP30Q70CQ3 517 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 TMEM173Q86WV6 379 aaPredicted RBP12.39□□□□□ -0.43
CHD1L-210ENST00000622533 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 HEXA-AS1Q9H8Q6 139 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 EYSQ5T1H1 3165 aa12.39□□□□□ -0.43
CHD1L-210ENST00000622533 GREM1O60565 184 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 SLC43A1O75387 559 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 ZNF821O75541 412 aaPredicted RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 ABLIM3O94929 683 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 IL1AP01583 271 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 SYPP08247 313 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 EPHA5P54756 1037 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 CTBP2P56545 445 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 RAE1P78406 368 aaKnown RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 ZNF630Q2M218 657 aaPredicted RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 CRB2Q5IJ48 1285 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 BCL2L15Q5TBC7 163 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 TMEM81Q6P7N7 255 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 FBXW5Q969U6 566 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 CPEB1Q9BZB8 566 aaKnown RBP12.38□□□□□ -0.43
CHD1L-210ENST00000622533 PPP1R3EQ9H7J1 279 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 PLXNB3Q9ULL4 1909 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 ALPK3Q96L96 1907 aa12.38□□□□□ -0.43
CHD1L-210ENST00000622533 PRAMEF33A0A0G2JMD5 474 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms