RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 NARSO43776 548 aaKnown RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 NDUFS2O75306 463 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 CCNB2O95067 398 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 NR2F1P10589 423 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 ZNF182P17025 639 aaPredicted RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 GGT2P36268 569 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 LIMS1P48059 325 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 HMGA2P52926 109 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 SRP54P61011 504 aaKnown RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 NFATC3Q12968 1075 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 TRIM73Q86UV7 250 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 VANGL1Q8TAA9 524 aaPredicted RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 UTP15Q8TED0 518 aaKnown RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 APOBEC4Q8WW27 367 aaKnown RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 RORBQ92753 470 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 KLF15Q9UIH9 416 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 PCOLCE2Q9UKZ9 415 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 A0A1W2PS29 197 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 FFAR1O14842 300 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 RGS10O43665 173 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 FOXD2O60548 495 aaPredicted RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 FADS2O95864 444 aaKnown RBP12.87□□□□□ -0.35
NEK3-205ENST00000610828 MT-ND2P03891 347 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 F3P13726 295 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 GABRG2P18507 467 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 NR4A1P22736 598 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 AKT2P31751 481 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 BTN3A2P78410 334 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 DUSP2Q05923 314 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 TMEM107Q6UX40 140 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 AHSA2Q719I0 299 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 AQP11Q8NBQ7 271 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 SUN3Q8TAQ9 357 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 SLC22A18Q96BI1 424 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 ZNF354BQ96LW1 612 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 TRPV5Q9NQA5 729 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 SEMA3GQ9NS98 782 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 A8MVJ9 347 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 C2CD4DB7Z1M9 353 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 FAM227AF5H4B4 570 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 H3BQ06 376 aaPredicted RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 SERPINB7O75635 380 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 ZBTB11O95625 1053 aaPredicted RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 MAGP20916 626 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 CD6P30203 668 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 TSFMP43897 325 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 ARFIP1P53367 373 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 RPS15AP62244 130 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 TGM3Q08188 693 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 ALG11Q2TAA5 492 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 COLEC12Q5KU26 742 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 SLC48A1Q6P1K1 146 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 DEF8Q6ZN54 512 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 OLIG3Q7RTU3 272 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 RBM45Q8IUH3 476 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 OR10G6Q8NH81 332 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 DNASE1L2Q92874 299 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 CSF3RQ99062 836 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 MAPKAP1Q9BPZ7 522 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 ZNF576Q9H609 170 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 CCNB1IP1Q9NPC3 277 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 TNFRSF10CO14798 259 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 PROM1O43490 865 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 KCNJ5P48544 419 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 KHKP50053 298 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 RGS1Q08116 209 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 TCTN3Q6NUS6 607 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 BHLHB9Q6PI77 547 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 DHRS4L2Q6PKH6 230 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 Q6ZSR6 202 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 SLC44A3Q8N4M1 653 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 NMNAT1Q9HAN9 279 aaPredicted RBP12.86□□□□□ -0.35
NEK3-205ENST00000610828 AMBNQ9NP70 447 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 CES1P1Q9UKY3 287 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
NEK3-205ENST00000610828 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 USP34Q70CQ2 3546 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 COL4A2P08572 1712 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 TRBV4-1A0A0J9YWV2 114 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 A6NCN8 305 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 SEMA7AO75326 666 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms