RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 COL9A2Q14055 689 aaPredicted RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 PROX2Q3B8N5 592 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 RAET1LQ5VY80 246 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 KIAA1614Q5VZ46 1190 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 LPCAT4Q643R3 524 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 LARP4Q71RC2 724 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 TMPRSS7Q7RTY8 843 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF786Q8N393 782 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ACTRT2Q8TDY3 377 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 CT55Q8WUE5 264 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 WDR60Q8WVS4 1066 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ABTB1Q969K4 478 aaPredicted RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SFXN2Q96NB2 322 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 OR1F2PQ96R84 312 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 TMEM79Q9BSE2 394 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 REEP4Q9H6H4 257 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SCHIP1Q9P0W5 487 aaPredicted RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 RAXQ9Y2V3 346 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 TRGV8A0A0C4DH27 118 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 MYOCOSA0A1B0GUC4 107 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 MCIDASD6RGH6 385 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 E2F3O00716 465 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SCO2O43819 266 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SERPINI2O75830 405 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 RSL1D1O76021 490 aaKnown RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 AGFG2O95081 481 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ALDOAP04075 364 aaKnown RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 CHRNGP07510 517 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 GP1BBP13224 206 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 HOXB3P14651 431 aaPredicted RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 GDF1P27539 372 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 HSD17B7P56937 341 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 REEP5Q00765 189 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 INSM1Q01101 510 aaPredicted RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 C19orf57Q0VDD7 668 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 TMED1Q13445 227 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 PDK3Q15120 406 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 CGB2Q6NT52 195 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 CPEB2Q7Z5Q1 589 aaKnown RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ISCA2Q86U28 154 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SIRT6Q8N6T7 355 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 FBXO30Q8TB52 745 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 NMD3Q96D46 503 aaKnown RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 NPAS2Q99743 824 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 MACROD1Q9BQ69 325 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 ADNPQ9H2P0 1102 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SPAG4Q9NPE6 437 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 MKS1Q9NXB0 559 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SEC14L3Q9UDX4 400 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 POMPQ9Y244 141 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 LRRC42Q9Y546 428 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 PCDHGA8Q9Y5G5 932 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 SLC22A7Q9Y694 548 aa4.88□□□□□ -1.63
SCARNA15-201ENST00000607520 DPPA5A6NC42 116 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CTNSO60931 367 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 IL3P08700 152 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ZGLP1P0C6A0 271 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF23P17027 643 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CDH2P19022 906 aaPredicted RBP4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CXCR1P25024 350 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ETV4P43268 484 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CCT3P49368 545 aaKnown RBP4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CHN2P52757 468 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CLDN6P56747 220 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 EEFSECP57772 596 aaKnown RBP4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ERVK-8P63133 956 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 UBE2IP63279 158 aaKnown RBP4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 CHRNB3Q05901 458 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 FZD5Q13467 585 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 PCLAFQ15004 111 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 OR4D1Q15615 310 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 TIGD2Q4W5G0 525 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 EIPR1Q53HC9 387 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 VWA2Q5GFL6 755 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF678Q5SXM1 525 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 NDUFAF5Q5TEU4 345 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 PWWP2BQ6NUJ5 590 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ATG14Q6ZNE5 492 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 OVCH1Q7RTY7 1134 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 NUP54Q7Z3B4 507 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 SLC22A16Q86VW1 577 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 TREML1Q86YW5 311 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 VWA5B2Q8N398 1253 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 D2HGDHQ8N465 521 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 POMGNT2Q8NAT1 580 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 OR56A3Q8NH54 315 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 UCN3Q969E3 161 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 LHPPQ9H008 270 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 SEMA6AQ9H2E6 1030 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 DMRT3Q9NQL9 472 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 METRNQ9UJH8 293 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ADAMTS6Q9UKP5 1117 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ERVK-19Q9WJR5 959 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 PCDHGA7Q9Y5G6 932 aa4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 TDRD6O60522 2096 aaKnown RBP4.87□□□□□ -1.63
SCARNA15-201ENST00000607520 ASCC3Q8N3C0 2202 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms