RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SNX7Q9UNH6 387 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 ERVK-11Q9UQG0 969 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 SH2B3Q9UQQ2 575 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 TMEM98Q9Y2Y6 226 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 PCDHGA3Q9Y5H0 932 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 HCFC2Q9Y5Z7 792 aa6.8□□□□□ -1.32
SPIDR-228ENST00000588781 GPC6Q9Y625 555 aaPredicted RBP6.8□□□□□ -1.32
SPIDR-228ENST00000588781 MN1Q10571 1320 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 DENND4AQ7Z401 1863 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CHD7Q9P2D1 2997 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TRANK1O15050 2925 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 A0A075B6Q4 140 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 A0A0A6YYD5 115 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 A0A1W2PRQ8 180 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 URADA6NGE7 173 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 IGLON5A6NGN9 336 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 AGAP5A6NIR3 686 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 DUXAA6NLW8 204 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 H3BN98 237 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TMX2-CTNND1H3BSU7 103 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 H7BY64 318 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 K7ESM1 405 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TOR1BO14657 336 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PCDH17O14917 1159 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MYL12BO14950 172 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MAGEB3O15480 346 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ZW10O43264 779 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 EMC8O43402 210 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 NME6O75414 186 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 UPK1BO75841 260 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 KAT7O95251 611 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PTTG1O95997 202 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 STSP08842 583 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 HOXC4P09017 264 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 DBTP11182 482 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 BMP4P12644 408 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CSNK2A2P19784 350 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF10P21506 573 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 NR4A1P22736 598 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CHMP24386 653 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 GADD45AP24522 165 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PSMA1P25786 263 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ELAVL4P26378 380 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 POU1F1P28069 291 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ALDH4A1P30038 563 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MPIP34949 423 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SLC19A1P41440 591 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 VIPR2P41587 438 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 IL12RB1P42701 662 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TNFRSF4P43489 277 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 RGS6P49758 472 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 NCBP2P52298 156 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SMSP52788 366 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TAS2R38P59533 333 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 NCS1P62166 190 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CYP4F2P78329 520 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CSNK1G2P78368 415 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 RUNX1T1Q06455 604 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 RGS1Q08116 209 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 HSPB3Q12988 150 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 GPM6BQ13491 265 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 RUNX3Q13761 415 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CST6Q15828 149 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TBC1D25Q3MII6 688 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SLC25A30Q5SVS4 291 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TPRG1LQ5T0D9 272 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 C12orf73Q69YU5 71 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 LAIR1Q6GTX8 287 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TNFAIP8L2Q6P589 184 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 KLHL17Q6TDP4 642 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 DEF8Q6ZN54 512 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PRR23CQ6ZRP0 262 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MTSS1LQ765P7 747 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TSEN54Q7Z6J9 526 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CCDC71Q8IV32 467 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ZNF740Q8NDX6 193 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ST13P5Q8NFI4 369 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 B3GNT7Q8NFL0 401 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 OR9Q2Q8NGE9 314 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 WDR36Q8NI36 951 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 GNPDA2Q8TDQ7 276 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SLC38A5Q8WUX1 472 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 EXOSC8Q96B26 276 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PRRC1Q96M27 445 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 PRAP1Q96NZ9 151 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 TRNT1Q96Q11 434 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SLC38A2Q96QD8 506 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MGLLQ99685 303 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 MYOCQ99972 504 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 DPH7Q9BTV6 452 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 CCDC32Q9BV29 185 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SARGQ9BW04 601 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 ACAT2Q9BWD1 397 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 POLDIP3Q9BY77 421 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 POLR2J2Q9GZM3 115 aaKnown RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 RSPH9Q9H1X1 276 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-228ENST00000588781 SPNS1Q9H2V7 528 aa6.79□□□□□ -1.32
SPIDR-228ENST00000588781 FZD3Q9NPG1 666 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms