RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 OR7G1Q8NGA0 311 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 DNAJB8Q8NHS0 232 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 RIT1Q92963 219 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 APIPQ96GX9 242 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 C5orf34Q96MH7 638 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CDCP1Q9H5V8 836 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF395Q9H8N7 513 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 LRTM1Q9HBL6 345 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 CES1P1Q9UKY3 287 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 ENTPD4Q9Y227 616 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 RAP2CQ9Y3L5 183 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
PRKCSH-202ENST00000585540 A8MUA0 341 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 HSPA4LO95757 839 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 DDAH2O95865 285 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 GBAP04062 536 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ANXA4P09525 319 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 DDCP20711 480 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 HLCSP50747 726 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 XKP51811 444 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ABCE1P61221 599 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 FOXK1P85037 733 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 NR6A1Q15406 480 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 INPP5JQ15735 1006 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 MPEG1Q2M385 716 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 PLEKHN1Q494U1 663 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 SLC29A4Q7RTT9 530 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 FAM9CQ8IZT9 166 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 LRRC25Q8N386 305 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 C17orf47Q8NEP4 570 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 SLC22A8Q8TCC7 542 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF675Q8TD23 568 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF721Q8TF20 911 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 MIB2Q96AX9 1013 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 KLHL29Q96CT2 875 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 SCMH1Q96GD3 660 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 SENP5Q96HI0 755 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 OR8D2Q9GZM6 311 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 CXorf21Q9HAI6 301 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 MIEF1Q9NQG6 463 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 MYOTQ9UBF9 498 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 DLGAP4Q9Y2H0 992 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 CCL27Q9Y4X3 112 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 CNTRLQ7Z7A1 2325 aa12.85□□□□□ -0.35
PRKCSH-202ENST00000585540 BSNQ9UPA5 3926 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 SMG1Q96Q15 3661 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 TBX19O60806 448 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 VPS4BO75351 444 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 ITGA10O75578 1167 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 IL3P08700 152 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 SSR4P51571 173 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 RNF4P78317 190 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 RAE1P78406 368 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 FUT7Q11130 342 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 MAP4K2Q12851 820 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 TUBA3CQ13748 450 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 KIAA0040Q15053 153 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 XKR7Q5GH72 579 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 NOXRED1Q6NXP6 359 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 TUBA3EQ6PEY2 450 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 OPN5Q6U736 354 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 KIF2BQ8N4N8 673 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 TMEM156Q8N614 296 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 NATD1Q8N6N6 113 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 POGLUT1Q8NBL1 392 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 TP53INP1Q96A56 240 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 MTERF3Q96E29 417 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 SGCZQ96LD1 299 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 BARD1Q99728 777 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 C20orf27Q9GZN8 174 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 UTS2RQ9UKP6 389 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 VPS4AQ9UN37 437 aa12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 KLF13Q9Y2Y9 288 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 COPG1Q9Y678 874 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-202ENST00000585540 CAPN14A8MX76 684 aa12.83□□□□□ -0.36
PRKCSH-202ENST00000585540 SLCO1B7G3V0H7 640 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms