RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 TRMT10AQ8TBZ6 339 aaKnown RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 RNF128Q8TEB7 428 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 WFIKKN2Q8TEU8 576 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 PHYHIPQ92561 330 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 OXNAD1Q96HP4 312 aaPredicted RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 PDLIM2Q96JY6 352 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 MARK4Q96L34 752 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 FCRL4Q96PJ5 515 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 VPS35Q96QK1 796 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 BCL7BQ9BQE9 202 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 SLC39A3Q9BRY0 314 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 MIS12Q9H081 205 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 SDCBP2Q9H190 292 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 NOX4Q9NPH5 578 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 TCF7L2Q9NQB0 619 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 PHPT1Q9NRX4 125 aaPredicted RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 TMEM45AQ9NWC5 275 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 SPHK1Q9NYA1 384 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 CNOT11Q9UKZ1 510 aaKnown RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 ZNF490Q9ULM2 529 aaPredicted RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 TMED7Q9Y3B3 224 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 VPS13AQ96RL7 3174 aa7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 FNDC1Q4ZHG4 1894 aaPredicted RBP7.12□□□□□ -1.27
SUPT4H1-207ENST00000581540 BECN2A8MW95 431 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 POLR3GO15318 223 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 CPNE6O95741 557 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 MMP1P03956 469 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ITGB3P05106 788 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 GSTA2P09210 222 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ITGB6P18564 788 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ITGB7P26010 798 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 GNL1P36915 607 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SLC1A4P43007 532 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RGS4P49798 205 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 PDX1P52945 283 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 HERV-K104P63124 156 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SRSF5Q13243 272 aaKnown RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ZNF268Q14587 947 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RFTN1Q14699 578 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 PTPAQ15257 358 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 EXOC3L2Q2M3D2 409 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ZC2HC1CQ53FD0 456 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 AGKQ53H12 422 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 Q5PR19 223 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 ZSCAN25Q6NSZ9 544 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RHOUQ7L0Q8 258 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 BNIPLQ7Z465 357 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 YRDCQ86U90 279 aaKnown RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 MAP7D3Q8IWC1 876 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 UBQLNLQ8IYU4 475 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 TMEM99Q8N816 258 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SLC22A8Q8TCC7 542 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RND1Q92730 232 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RAB39BQ96DA2 213 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 TMEM19Q96HH6 336 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RAB40CQ96S21 281 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 CMKLR1Q99788 373 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SH2D3AQ9BRG2 576 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SPRTNQ9H040 489 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 RIMS4Q9H426 269 aaPredicted RBP7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 APMAPQ9HDC9 416 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 SLC2A4RGQ9NR83 387 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 PCDHA7Q9UN72 937 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 OR10H1Q9Y4A9 318 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 MYO10Q9HD67 2058 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 CACNA1GO43497 2377 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 MYH7BA7E2Y1 1941 aa7.11□□□□□ -1.27
SUPT4H1-207ENST00000581540 PLIN4Q96Q06 1357 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 TRBV5-3A0A0A0MS03 114 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 ANKRD61A6NGH8 418 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 C4orf47A7E2U8 309 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 RSPH10B2B2RC85 870 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 ARPC2O15144 300 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 ITM2AO43736 263 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 EXTL3O43909 919 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 NDUFS7O75251 213 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 BCAR3O75815 825 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 PAHP00439 452 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 MT-ND1P03886 318 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 RSPH10BP0C881 870 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 STAG3L3P0CL85 134 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 ANPEPP15144 967 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 GOT1P17174 413 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 JAK1P23458 1154 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 CA8P35219 290 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 DLSTP36957 453 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 RPL3P39023 403 aaKnown RBP7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 PTGFRP43088 359 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 RAP1GAPP47736 663 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 ACADVLP49748 655 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 VAMP7P51809 220 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 NCBP1Q09161 790 aaKnown RBP7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 MSLNQ13421 630 aaPredicted RBP7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 DUSP6Q16828 381 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 C20orf194Q5TEA3 1177 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 BLOC1S2Q6QNY1 142 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 CBLN3Q6UW01 205 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 LONP2Q86WA8 852 aa7.1□□□□□ -1.27
SUPT4H1-207ENST00000581540 UBALD2Q8IYN6 164 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms