RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TSFMP43897 325 aaKnown RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 GBX2P52951 348 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 PRKCEQ02156 737 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 GABPB1Q06547 395 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 SCN1BQ07699 218 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CHIT1Q13231 466 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CDH18Q13634 790 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 WDR43Q15061 677 aaKnown RBP eCLIP3.76□□□□□ -1.81
NF1-220ENST00000581113 NECTIN1Q15223 517 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 KCTD21Q4G0X4 260 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ANKRD20A4Q4UJ75 823 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 LBHQ53QV2 105 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 FASTKD1Q53R41 847 aaKnown RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 ANKRD20A8PQ5CZ79 823 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ANKRD20A2Q5SQ80 823 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ANKRD20A1Q5TYW2 823 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ANKRD20A3Q5VUR7 823 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CYB5D1Q6P9G0 228 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CLEC2AQ6UVW9 174 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 MOXD1Q6UVY6 613 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 SPATA21Q7Z572 469 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ADCK1Q86TW2 530 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 LRRTM1Q86UE6 522 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CCDC110Q8TBZ0 833 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 NDNQ99608 321 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CDCA3Q99618 268 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 CCDC94Q9BW85 323 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 TRIM15Q9C019 465 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 UPF3AQ9H1J1 476 aaKnown RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.76□□□□□ -1.81
NF1-220ENST00000581113 ABCB8Q9NUT2 735 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CYP39A1Q9NYL5 469 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 SPASTQ9UBP0 616 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 PRSS21Q9Y6M0 314 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CSNK1G3Q9Y6M4 447 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CEP350Q5VT06 3117 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 DLEC1Q9Y238 1755 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 LRRIQ4A6NIV6 560 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 CYSRT1A8MQ03 144 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 VGLL3A8MV65 326 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 C17orf105B2RV13 164 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 DCXO43602 365 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 KRT33AO76009 404 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 SORBS2O94875 1100 aaKnown RBP3.75□□□□□ -1.81
NF1-220ENST00000581113 ZSCAN5DPP0CG00 497 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 TRIM49P0CI25 452 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 TRIM49CP0CI26 452 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 F3P13726 295 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 ETS1P14921 441 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 EIF2S2P20042 333 aaKnown RBP3.75□□□□□ -1.81
NF1-220ENST00000581113 IL10P22301 178 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 ELAVL4P26378 380 aaKnown RBP3.75□□□□□ -1.81
NF1-220ENST00000581113 HLA-FP30511 346 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 SOX3P41225 446 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 OR1G1P47890 313 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 OR3A2P47893 321 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 ETV1P50549 477 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 CAPZA1P52907 286 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 HUNKP57058 714 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 PLD1Q13393 1074 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 MTF1Q14872 753 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 KARSQ15046 597 aaKnown RBP3.75□□□□□ -1.81
NF1-220ENST00000581113 C1orf185Q5T7R7 199 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 SUSD4Q5VX71 490 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 PM20D1Q6GTS8 502 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 OR4C11Q6IEV9 310 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 CENPPQ6IPU0 288 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 FAAP20Q6NZ36 180 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 KCTD9Q7L273 389 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 RCOR2Q8IZ40 523 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 FAM89BQ8N5H3 189 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 OR4C15Q8NGM1 316 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 NSMCE3Q96MG7 304 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 VGLL1Q99990 258 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 TMEM206Q9H813 350 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 COQ10BQ9H8M1 238 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 PRDM4Q9UKN5 801 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 SELENOKQ9Y6D0 94 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 TEX264Q9Y6I9 313 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 UBN2Q6ZU65 1347 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 ABCC12Q96J65 1359 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 IBTKQ9P2D0 1353 aaPredicted RBP3.75□□□□□ -1.81
NF1-220ENST00000581113 BCORQ6W2J9 1755 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 ANKRD31Q8N7Z5 1873 aa3.75□□□□□ -1.81
NF1-220ENST00000581113 KDM3BQ7LBC6 1761 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 FAM205AQ6ZU69 1335 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 CTAGE5O15320 804 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 PRAF2O60831 178 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 E2F6O75461 281 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 ERLIN1O75477 346 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 FGFR1OPO95684 399 aaKnown RBP3.74□□□□□ -1.81
NF1-220ENST00000581113 PDGFBP01127 241 aaPredicted RBP3.74□□□□□ -1.81
NF1-220ENST00000581113 TGFAP01135 160 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 CD9P21926 228 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 MFAP3P55082 362 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 DCDC1P59894 354 aa3.74□□□□□ -1.81
NF1-220ENST00000581113 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
NF1-220ENST00000581113 CYCSP99999 105 aaKnown RBP3.74□□□□□ -1.81
NF1-220ENST00000581113 GFPT1Q06210 699 aaPredicted RBP3.74□□□□□ -1.81
NF1-220ENST00000581113 SULT2A1Q06520 285 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms