RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CLDN16Q9Y5I7 305 aa6.93□□□□□ -1.3
NUP88-205ENST00000572809 CLCA3PQ9Y6N3 262 aa6.93□□□□□ -1.3
NUP88-205ENST00000572809 SPACA6W5XKT8 324 aa6.93□□□□□ -1.3
NUP88-205ENST00000572809 PRRC2CQ9Y520 2896 aaKnown RBP6.93□□□□□ -1.3
NUP88-205ENST00000572809 DOPEY2Q9Y3R5 2298 aa6.93□□□□□ -1.3
NUP88-205ENST00000572809 CPAMD8Q8IZJ3 1885 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 TRBV11-1A0A0K0K1C0 115 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 A0A1B0GUH1 482 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 EXOC1LA0A1B0GW35 172 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 B2RBV5 119 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 STX16-NPEPL1H3BU86 382 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 FCHO1O14526 889 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 STX16O14662 325 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 LDB3O75112 727 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SMIM24O75264 130 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 NEURL1O76050 574 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 ZFAND5O76080 213 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SCELO95171 688 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 UNC5CO95185 931 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 LDLRP01130 860 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 STSP08842 583 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RHOXF2BP0C7M4 288 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RNF224P0DH78 156 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 CPN2P22792 545 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 MST1P26927 711 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 PPP2R1BP30154 601 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 TRHRP34981 398 aaPredicted RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 ARL1P40616 181 aaPredicted RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 SSR2P43308 183 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 HLCSP50747 726 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 TDGF1P3P51864 188 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 NEK2P51955 445 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 CCNG1P51959 295 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 ARFIP1P53367 373 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RPS13P62277 151 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 PHEXP78562 749 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SLAMF1Q13291 335 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 BIKQ13323 160 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SERTAD2Q14140 314 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SLC29A2Q14542 456 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 ZRSR2Q15696 482 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 ELAVL1Q15717 326 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 CPSF6Q16630 551 aaKnown RBP eCLIP6.92□□□□□ -1.3
NUP88-205ENST00000572809 TRMT10CQ7L0Y3 403 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 GALNTL5Q7Z4T8 443 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 CLNKQ7Z7G1 428 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 ARMC10Q8N2F6 343 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 L3MBTL4Q8NA19 623 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 FAM98AQ8NCA5 519 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 MORN4Q8NDC4 146 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 WDR20Q8TBZ3 569 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 PTPMT1Q8WUK0 201 aaPredicted RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 DAZLQ92904 295 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 NCLNQ969V3 563 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 TMEM125Q96AQ2 219 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 MTFMTQ96DP5 389 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 VMP1Q96GC9 406 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SCMH1Q96GD3 660 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RBM18Q96H35 190 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 CSF3RQ99062 836 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 MRPL57Q9BQC6 102 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 RHOXF2Q9BQY4 288 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 NTMT1Q9BV86 223 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SORBS1Q9BX66 1292 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 HES7Q9BYE0 225 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 RPF2Q9H7B2 306 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 NOL11Q9H8H0 719 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 TRIM45Q9H8W5 580 aaPredicted RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 ADAP2Q9NPF8 381 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 DMRT3Q9NQL9 472 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 MS4A12Q9NXJ0 267 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 SEC14L3Q9UDX4 400 aa6.92□□□□□ -1.3
NUP88-205ENST00000572809 PPIEQ9UNP9 301 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 SPENQ96T58 3664 aaKnown RBP6.92□□□□□ -1.3
NUP88-205ENST00000572809 A1L4Q6 167 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ASPDHA6ND91 283 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 FOXE1O00358 373 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 PLPP1O14494 284 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 OR7A17O14581 309 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 RIPK2O43353 540 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 PROM1O43490 865 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 SUSD5O60279 629 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ITGA10O75578 1167 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 WISP2O76076 250 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 UBOX5O94941 541 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 MLYCDO95822 493 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TP53P04637 393 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 ABHD2P08910 425 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 FAM153BP0C7A2 387 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 RAB6AP20340 208 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 TLX1P31314 330 aaPredicted RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 PER3P56645 1201 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 KCNK10P57789 538 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 PMP22Q01453 160 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 ALDH6A1Q02252 535 aaKnown RBP6.91□□□□□ -1.3
NUP88-205ENST00000572809 CUL3Q13618 768 aa6.91□□□□□ -1.3
NUP88-205ENST00000572809 FAM153CQ494X1 144 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms