RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ABCC13Q9NSE7 274 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TMEM9Q9P0T7 183 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 KLHL21Q9UJP4 597 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 MYOM1P52179 1685 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 FAM208AQ9UK61 1670 aaKnown RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 UBN2Q6ZU65 1347 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 RGPD1P0DJD0 1748 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 MON2Q7Z3U7 1717 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 SHANK3Q9BYB0 1731 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 PARP4Q9UKK3 1724 aaKnown RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 CARMIL3Q8ND23 1372 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 PARD3Q8TEW0 1356 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 VCANP13611 3396 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TUBGCP6Q96RT7 1819 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TNS2Q63HR2 1409 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 ATP10DQ9P241 1426 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 CHD4Q14839 1912 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 SPTBN5Q9NRC6 3674 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 TOGARAM1Q9Y4F4 1720 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 RANBP2P49792 3224 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 CASZ1Q86V15 1759 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 EDDM13A0A1B0GTR0 161 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 GLOD5A6NK44 160 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 YDJCA8MPS7 323 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 PRSS46E5RG02 174 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 H3BMM5 538 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ENTPD3O75355 529 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 PRAMEF12O95522 483 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 FGF19O95750 216 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 CSH1P0DML2 217 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 CSH2P0DML3 217 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 DLATP10515 647 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 PSG2P11465 335 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 HMGCLP35914 325 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 RXRGP48443 463 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 CHAF1BQ13112 559 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 SIM2Q14190 667 aaPredicted RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 BECN1Q14457 450 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 C16orf72Q14CZ0 275 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 PPA1Q15181 289 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 PPP1R3AQ16821 1122 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.3□□□□□ -2.2
SMG1-212ENST00000566328 CST9Q5W186 159 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 C1orf122Q6ZSJ8 110 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 RFPL4BQ6ZWI9 263 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 MOB2Q70IA6 237 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ANKRD33Q7Z3H0 272 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 PIGWQ7Z7B1 504 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 DNAAF5Q86Y56 855 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 LINC00346Q8IVM7 164 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 GPR137CQ8N3F9 429 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ARL14Q8N4G2 192 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 SYT2Q8N9I0 419 aaPredicted RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 SLC4A11Q8NBS3 891 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ZNRF1Q8ND25 227 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 TEKT4Q8WW24 435 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 C16orf74Q96GX8 76 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 RSRC1Q96IZ7 334 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 CFAP53Q96M91 514 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 DBNDD1Q9H9R9 158 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 KLRF1Q9NZS2 232 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 MRPL15Q9P015 296 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 TRMT112Q9UI30 125 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 RNF24Q9Y225 148 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 NUDCQ9Y266 331 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 TAF1LQ8IZX4 1826 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ASTN1O14525 1302 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 SBF1O95248 1867 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 ZNFX1Q9P2E3 1918 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 HEG1Q9ULI3 1381 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 NINLQ9Y2I6 1382 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 REV3LO60673 3130 aa1.3□□□□□ -2.2
SMG1-212ENST00000566328 SMG6Q86US8 1419 aaKnown RBP1.3□□□□□ -2.2
SMG1-212ENST00000566328 RREB1Q92766 1687 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 LY75O60449 1722 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 C4BP0C0L5 1744 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 DOT1LQ8TEK3 1739 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 UNC80Q8N2C7 3258 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 XIRP2A4UGR9 3374 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 UBR3Q6ZT12 1888 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CASP8AP2Q9UKL3 1982 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 IGKV2D-24A0A075B6R9 120 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 TRAV18A0A075B6X5 111 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 CCDC189A1A4V9 331 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 A6NCN8 305 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 A8MV72 311 aaPredicted RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 SAP18O00422 153 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 EMC8O43402 210 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 ZBED4O75132 1171 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 LUC7L3O95232 432 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 IGKV5-2P06315 115 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 OR9G9P0C7N8 305 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 P4HA1P13674 534 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 HSD17B1P14061 328 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 HNRNPA2B1P22626 353 aaKnown RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 PPP2R1BP30154 601 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 TRPC1P48995 793 aa1.29□□□□□ -2.2
SMG1-212ENST00000566328 GMPSP49915 693 aaPredicted RBP1.29□□□□□ -2.2
SMG1-212ENST00000566328 LIG4P49917 911 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms