RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC29A3Q9BZD2 475 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FN3KQ9H479 309 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 IL26Q9NPH9 171 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CASS4Q9NQ75 786 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 WSB2Q9NYS7 404 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 A4GNTQ9UNA3 340 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RASD1Q9Y272 281 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 IFNA21P01568 189 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ITGB2P05107 769 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CMPK1P30085 196 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TRA2BP62995 288 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF92Q03936 586 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RPTNQ6XPR3 784 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CBARPQ8N350 705 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 OR7A2PQ8NGA2 310 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TBC1D15Q8TC07 691 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CANT1Q8WVQ1 401 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 NKX3-1Q99801 234 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 CCDC32Q9BV29 185 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RHBGQ9H310 441 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 C1orf198Q9H425 327 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ARHGEF3Q9NR81 526 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TRPC4Q9UBN4 977 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 KCNK6Q9Y257 313 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SH3GLB1Q9Y371 365 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 KIAA1671Q9BY89 1806 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 NLRC5Q86WI3 1866 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF860A6NHJ4 632 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 M0R036 132 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TP53I11O14683 189 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 OIP5O43482 229 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TSPAN6O43657 245 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FARS2O95363 451 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 LDLRP01130 860 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ORM1P02763 201 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ELK4P28324 431 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RBMXP38159 391 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 ALDH3A2P51648 485 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ERVPABLB-1P60509 514 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HOXC5Q00444 222 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RBPJQ06330 500 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SCN1BQ07699 218 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ERV3-1Q14264 604 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SQLEQ14534 574 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TIGD6Q17RP2 521 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZBED5Q49AG3 693 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FAM162BQ5T6X4 162 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RANBP10Q6VN20 620 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 B3GLCTQ6Y288 498 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF852Q6ZMS4 543 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RAB11FIP2Q7L804 512 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SYVN1Q86TM6 617 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CUZD1Q86UP6 607 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ZNF683Q8IZ20 524 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SMAP2Q8WU79 429 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 ISG20Q96AZ6 181 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 BARD1Q99728 777 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 WFDC6Q9BQY6 131 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RC3H2Q9HBD1 1191 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 DUS2Q9NX74 493 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 AKAP9Q99996 3911 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 hCG_2039718K7EN88 272 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CELA2BP08218 269 aaPredicted RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 DDCP20711 480 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CLCN7P51798 805 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MLLT10P55197 1068 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 HSD11B2P80365 405 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 TGFBIQ15582 683 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CCNJQ5T5M9 372 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ERN2Q76MJ5 926 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 EIF3MQ7L2H7 374 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 SYT12Q8IV01 421 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.2□□□□□ -1.98e-7■■■■■ 29.2
CHD9-213ENST00000564845 PHF10Q8WUB8 498 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 TWIST2Q8WVJ9 160 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC39A7Q92504 469 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC38A4Q969I6 547 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC35B4Q969S0 331 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 LYSMD1Q96S90 227 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 WACQ9BTA9 647 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 MIR1-1HGQ9H1L0 117 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RHOJQ9H4E5 214 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PRODH2Q9UF12 536 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CROCCQ5TZA2 2017 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 A0A0J9YYE9 177 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SLC7A4O43246 635 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ETHE1O95571 254 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 EML2O95834 649 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PROS1P07225 676 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 FCGR2AP12318 317 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 CAPN3P20807 821 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 C21orf59P57076 290 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 B4GALNT1Q00973 533 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 PCDH1Q08174 1060 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 RBM39Q14498 530 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 EXOSC6Q5RKV6 272 aaKnown RBP3.2□□□□□ -1.9
CHD9-213ENST00000564845 KDELC1Q6UW63 502 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 OR4K1Q8NGD4 311 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 SUSD6Q92537 303 aa3.2□□□□□ -1.9
CHD9-213ENST00000564845 ITPKCQ96DU7 683 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms