RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 NUBPLQ8TB37 319 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 PAQR8Q8TEZ7 354 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 CA5BP1Q8WTZ4 195 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ISL2Q96A47 359 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 GAL3ST4Q96RP7 486 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 FUT8Q9BYC5 575 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 WWTR1Q9GZV5 400 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ZNF703Q9H7S9 590 aaPredicted RBP12.48□□□□□ -0.41
VPS18-203ENST00000558855 NOL11Q9H8H0 719 aaKnown RBP12.48□□□□□ -0.41
VPS18-203ENST00000558855 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
VPS18-203ENST00000558855 PRM3Q9NNZ6 103 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 SACM1LQ9NTJ5 587 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ITGB1BP2Q9UKP3 347 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
VPS18-203ENST00000558855 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
VPS18-203ENST00000558855 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 ACSL3O95573 720 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 GPR75O95800 540 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 GLI4P10075 376 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 NR2F6P10588 404 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 TYK2P29597 1187 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 DLX5P56178 289 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 PLIN5Q00G26 463 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 TLE4Q04727 773 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 CUL3Q13618 768 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 FAM83EQ2M2I3 478 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 SLC22A16Q86VW1 577 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 TMEM151AQ8N4L1 468 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 OR5L2Q8NGL0 311 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 OR5M3Q8NGP4 307 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 LILRB4Q8NHJ6 448 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 DCAKDQ8WVC6 231 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 SLC44A1Q8WWI5 657 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 NRGNQ92686 78 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 TANKQ92844 425 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 COPS7AQ9UBW8 275 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 Q9UFV3 132 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 ZNF225Q9UK10 706 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 PCDHGA11Q9Y5H2 935 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.47□□□□□ -0.41
VPS18-203ENST00000558855 SPACA6W5XKT8 324 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 CCDC168Q8NDH2 2452 aa12.47□□□□□ -0.41
VPS18-203ENST00000558855 MED13LQ71F56 2210 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 SYCE1LA8MT33 242 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 ACOT7O00154 380 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 AQP7O14520 342 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 P04436 131 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 FBXO45P0C2W1 286 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 MSX1P28360 303 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 GCAP28676 217 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 CHRNB4P30926 498 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 TRPC1P48995 793 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
VPS18-203ENST00000558855 TESK1Q15569 626 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 TCHHL1Q5QJ38 904 aaPredicted RBP12.46□□□□□ -0.41
VPS18-203ENST00000558855 FNDC7Q5VTL7 733 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 FAM180BQ6P0A1 224 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 LETMD1Q6P1Q0 360 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 RNF111Q6ZNA4 994 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 PRR22Q8IZ63 422 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 C14orf79Q96F83 325 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 HBEGFQ99075 208 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 PAFAH2Q99487 392 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 CXorf21Q9HAI6 301 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 LYARQ9NX58 379 aaKnown RBP12.46□□□□□ -0.41
VPS18-203ENST00000558855 COQ3Q9NZJ6 369 aa12.46□□□□□ -0.41
VPS18-203ENST00000558855 DOCK7Q96N67 2140 aa12.46□□□□□ -0.42
VPS18-203ENST00000558855 SYNDIG1LA6NDD5 238 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 FOXE1O00358 373 aaPredicted RBP12.45□□□□□ -0.42
VPS18-203ENST00000558855 UGDHO60701 494 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 CLDN9O95484 217 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 RPS17P08708 135 aaKnown RBP12.45□□□□□ -0.42
VPS18-203ENST00000558855 COX7A2P14406 83 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 S1PR1P21453 382 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 PTX3P26022 381 aaPredicted RBP12.45□□□□□ -0.42
VPS18-203ENST00000558855 ACVR2AP27037 513 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 SSTR2P30874 369 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 CDH13P55290 713 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 FBXW4P57775 412 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 SGO1Q5FBB7 561 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 NDUFAF5Q5TEU4 345 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 NUDT13Q86X67 352 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 RELL1Q8IUW5 271 aa12.45□□□□□ -0.42
VPS18-203ENST00000558855 LRRC25Q8N386 305 aaPredicted RBP12.45□□□□□ -0.42
VPS18-203ENST00000558855 FBXW8Q8N3Y1 598 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms