RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 EIF2S3P41091 472 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 GRIA2P42262 883 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ARF3P61204 181 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ARF1P84077 181 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 LYPLAL1Q5VWZ2 237 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HSD11B1LQ7Z5J1 315 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 NECAB2Q7Z6G3 386 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 C12orf40Q86WS4 652 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ZFAND4Q86XD8 727 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 LRRC17Q8N6Y2 441 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 NAT16Q8N8M0 369 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CANT1Q8WVQ1 401 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ADAMTS14Q8WXS8 1223 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 LRTOMTQ8WZ04 291 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF707Q96C28 371 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 RSPRY1Q96DX4 576 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 HOPXQ9BPY8 73 aaPredicted RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 KCNS3Q9BQ31 491 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 MND1Q9BWT6 205 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 Q9H521 79 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SMOXQ9NWM0 555 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 MARK1Q9P0L2 795 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 EGFL7Q9UHF1 273 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SLC25A13Q9UJS0 675 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 CORO2BQ9UQ03 480 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 PDE10AQ9Y233 779 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 EIF3LQ9Y262 564 aaKnown RBP4.86□□□□□ -1.63
TMEM260-210ENST00000556422 ALG5Q9Y673 324 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 SPACA6W5XKT8 324 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 VCANP13611 3396 aa4.86□□□□□ -1.63
TMEM260-210ENST00000556422 RNF103-CHMP3A0A140T963 221 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TSPAN11A1L157 253 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 C7orf72A4D263 438 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LINC01553A4QN01 128 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FAM149AA5PLN7 773 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 POM121BA6NF01 834 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SLC31A2O15432 143 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PRAMEF4O60810 478 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LEFTY1O75610 366 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AHSA1O95433 338 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OTCP00480 354 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FGBP02675 491 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 OR4E1P0C645 316 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CKMT1AP12532 417 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SYN1P17600 705 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CEBPBP17676 345 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TUBG1P23258 451 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PTX3P26022 381 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 HOXA9P31269 272 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GRIA3P42263 894 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RGS4P49798 205 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 POLR2JP52435 117 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FOXM1Q08050 763 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CHIT1Q13231 466 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PTGR1Q14914 329 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ATP6AP1LQ52LC2 224 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TCEAL5Q5H9L2 206 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MTX3Q5HYI7 312 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TOR1AIP1Q5JTV8 583 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF697Q5TEC3 545 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PRAMEF9Q5VWM5 478 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LCN8Q6JVE9 175 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DLEU7Q6UYE1 221 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GDPD4Q6W3E5 623 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RNF165Q6ZSG1 346 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CAMKMTQ7Z624 323 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CCDC71Q8IV32 467 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RASGRP3Q8IV61 690 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 LIX1LQ8IVB5 337 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF561Q8N587 486 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 DNAJB14Q8TBM8 379 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM74Q96NL1 305 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZBTB18Q99592 522 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 COPS8Q99627 209 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RAD9AQ99638 391 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SEMA6AQ9H2E6 1030 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SMOC1Q9H4F8 434 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TUBG2Q9NRH3 451 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 NDUFAF4Q9P032 175 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ERVW-1Q9UQF0 538 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CA5BQ9Y2D0 317 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SLC9A8Q9Y2E8 581 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RNF11Q9Y3C5 154 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 AP4S1Q9Y587 144 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM202A6NGA9 273 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TEX46H3BTG2 121 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 FFAR3O14843 346 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GPR42O15529 346 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 SPINT1O43278 529 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 PRAMEF2O60811 474 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 CBR3O75828 277 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ASGR2P07307 311 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MYOGP15173 224 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 GGT5P36269 586 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ACAA2P42765 397 aaKnown RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 RAB13P51153 203 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 TAS2R60P59551 318 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 MEF2AQ02078 507 aaPredicted RBP4.85□□□□□ -1.63
TMEM260-210ENST00000556422 EMX2Q04743 252 aa4.85□□□□□ -1.63
TMEM260-210ENST00000556422 ZFP69Q49AA0 526 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms