RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 AHCYP23526 432 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 S100A11P31949 105 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PCP4P48539 62 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TIAL1Q01085 375 aaKnown RBP eCLIP9.09□□□□□ -0.95
SIX4-202ENST00000554079 ABHD18Q0P651 414 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 MTMR1Q13613 665 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SSX2Q16385 188 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 GOLGA7BQ2TAP0 167 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PKDCCQ504Y2 493 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 QSOX2Q6ZRP7 698 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 KDELC2Q7Z4H8 507 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TMEM17Q86X19 198 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SLC5A8Q8N695 610 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PXT1Q8NFP0 134 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 BEST4Q8NFU0 473 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RHEBL1Q8TAI7 183 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 CLEC4CQ8WTT0 213 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 C7orf34Q96L11 122 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 MS4A4EQ96PG1 132 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 UBL7Q96S82 380 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 NLNQ9BYT8 704 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 DEFB129Q9H1M3 183 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RNF122Q9H9V4 155 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 NLGN3Q9NZ94 848 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 YARS2Q9Y2Z4 477 aaKnown RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 SF3B6Q9Y3B4 125 aaKnown RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 PLEKHM1Q9Y4G2 1056 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PCDHGC4Q9Y5F7 938 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PCDHGA5Q9Y5G8 931 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PCDHGA1Q9Y5H4 931 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SRCAPQ6ZRS2 3230 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ARHGEF33A8MVX0 844 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 DISC1C4P0D8 188 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 PSMD3O43242 534 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TREHO43280 583 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SSNA1O43805 119 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 GALR3O60755 368 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 SEMA7AO75326 666 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 HPXP02790 462 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 GP1BAP07359 652 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 HEXBP07686 556 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 HMBSP08397 361 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 LCP1P13796 627 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 FDXRP22570 491 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TM4SF1P30408 202 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 CRKP46108 304 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RGS4P49798 205 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 HTR6P50406 440 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RABGGTBP53611 331 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SNX16P57768 344 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RPS25P62851 125 aaKnown RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 MLLT1Q03111 559 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 KCNAB1Q14722 419 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TAF1CQ15572 869 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 GUCA2BQ16661 112 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SOWAHAQ2M3V2 549 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 FAM174BQ3ZCQ3 159 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TMEM255AQ5JRV8 349 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SPANXN4Q5MJ08 99 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 LRIF1Q5T3J3 769 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 MEDAGQ5VYS4 303 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RNLSQ5VYX0 342 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 DCAF15Q66K64 600 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ZNF660Q6AZW8 331 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 PAQR6Q6TCH4 344 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 NUDT18Q6ZVK8 323 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TMUB2Q71RG4 321 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 FAM131BQ86XD5 332 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SERPINA12Q8IW75 414 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 SKA3Q8IX90 412 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ZNF707Q96C28 371 aaPredicted RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 ART5Q96L15 291 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 TSNAXQ99598 290 aaKnown RBP9.09□□□□□ -0.95
SIX4-202ENST00000554079 NIPSNAP1Q9BPW8 284 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 C1QTNF3Q9BXJ4 246 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ENKD1Q9H0I2 346 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 ZFP57Q9NU63 452 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 RLIMQ9NVW2 624 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 EXTL2Q9UBQ6 330 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 CA5BQ9Y2D0 317 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
SIX4-202ENST00000554079 OR2W5A6NFC9 320 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 STX11O75558 287 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 SNAPC5O75971 98 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 HEXAP06865 529 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 NPR2P20594 1047 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 NFYAP23511 347 aaPredicted RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 CTNNB1P35222 781 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 STARD6P59095 220 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 AP1S1P61966 158 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 PGM5Q15124 567 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 TTLL9Q3SXZ7 439 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 ZRANB3Q5FWF4 1079 aa9.08□□□□□ -0.96
SIX4-202ENST00000554079 OTUD1Q5VV17 481 aaPredicted RBP9.08□□□□□ -0.96
SIX4-202ENST00000554079 HHIPL2Q6UWX4 724 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms