RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LRRC8BQ6P9F7 803 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 FAM199XQ6PEV8 388 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 DENND6AQ8IWF6 608 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CFAP206Q8IYR0 622 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CACNA2D3Q8IZS8 1091 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 LSM14AQ8ND56 463 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 STARD8Q92502 1023 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 NPIPB3Q92617 1050 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PMM1Q92871 262 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PEX13Q92968 403 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ULK4Q96C45 1275 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 WBP1Q96G27 269 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF514Q96K75 400 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 GPR78Q96P69 363 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 OR6C1Q96RD1 312 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CCM2Q9BSQ5 444 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 FRMD8P1Q9BZ68 369 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TSGA10Q9BZW7 698 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 AICDAQ9GZX7 198 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 DDX47Q9H0S4 455 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 TFB2MQ9H5Q4 396 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 NECTIN3Q9NQS3 549 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 SMYD2Q9NRG4 433 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PAPOLBQ9NRJ5 636 aaKnown RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 MSRB1Q9NZV6 116 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PAK5Q9P286 719 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 CRLS1Q9UJA2 301 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 SNX12Q9UMY4 172 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 B3GNT3Q9Y2A9 372 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KLHL20Q9Y2M5 609 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 PKP3Q9Y446 797 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 KLK4Q9Y5K2 254 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF469Q96JG9 3925 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-214ENST00000550893 NCKAP5O14513 1909 aa4.62□□□□□ -1.67
SCAF11-214ENST00000550893 NCOA6Q14686 2063 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 ZGRF1Q86YA3 2104 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 RP1L1Q8IWN7 2480 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 HEATR9A2RTY3 570 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 SLC9B1P1A6NJY1 282 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 C4orf51C9J302 202 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 TMX2-CTNND1H3BSU7 103 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 P2RX6O15547 441 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 RRP8O43159 456 aaKnown RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CEP104O60308 925 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 KCNJ13O60928 360 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CEACAM4O75871 244 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 AP2A2O94973 939 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 UMODP07911 640 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 RFPL3SP0C7P2 107 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CBSLP0DN79 551 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MCM3P25205 808 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 PRDX3P30048 256 aaKnown RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 STIP1P31948 543 aaKnown RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CSTF2P33240 577 aaKnown RBP eCLIP4.61□□□□□ -1.675e-9■■■■□ 25.1
SCAF11-214ENST00000550893 CBSP35520 551 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 HADHAP40939 763 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 NSG1P42857 185 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 SLC1A2P43004 574 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CD151P48509 253 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 HSPA7P48741 367 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CSRP3P50461 194 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 UCNP55089 124 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 NAP1L1P55209 391 aaKnown RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MRPS25P82663 173 aaKnown RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 RPA4Q13156 261 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 PRKG2Q13237 762 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CSHL1Q14406 222 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 BRD3Q15059 726 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 TRADDQ15628 312 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MPEG1Q2M385 716 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 ANXA2RQ3ZCQ2 193 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MIDNQ504T8 468 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 ACSBG2Q5FVE4 666 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MANEAQ5SRI9 462 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CCDC181Q5TID7 509 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 LIPMQ5VYY2 423 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 FAM219BQ5XKK7 198 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 STEAP4Q687X5 459 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 IRGCQ6NXR0 463 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 ZNF474Q6S9Z5 364 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-214ENST00000550893 SPESP1Q6UW49 350 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 TMEM207Q6UWW9 146 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CYHR1Q6ZMK1 362 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CNTN4Q8IWV2 1026 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 DSELQ8IZU8 1212 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 DNAJC22Q8N4W6 341 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 TRIM58Q8NG06 486 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 OR4E2Q8NGC2 313 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 OR4L1Q8NH43 312 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 OR5K2Q8NHB8 316 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 GDAP1Q8TB36 358 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CD200R1Q8TD46 325 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 ACTRT1Q8TDG2 376 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 INPP5DQ92835 1189 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 CXorf40BQ96DE9 158 aa4.61□□□□□ -1.67
SCAF11-214ENST00000550893 MED8Q96G25 268 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms