RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 KRCC1Q9NPI7 259 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 LHX9Q9NQ69 397 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 TRPV5Q9NQA5 729 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SIRT3Q9NTG7 399 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 FKBP14Q9NWM8 211 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 SERGEFQ9UGK8 458 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PCDHGA4Q9Y5G9 962 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 PCYT1BQ9Y5K3 369 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 ENTPD2Q9Y5L3 495 aa8.47□□□□□ -1.05
TMEM116-209ENST00000550020 KIF26AQ9ULI4 1882 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-209ENST00000550020 DNAH12Q6ZR08 3092 aa8.46□□□□□ -1.05
TMEM116-209ENST00000550020 MYOFQ9NZM1 2061 aa8.46□□□□□ -1.05
TMEM116-209ENST00000550020 A0A0J9YVX5 310 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 FAM221BA6H8Z2 402 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PRR23AA6NEV1 266 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ANHXE9PGG2 379 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PCDH17O14917 1159 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PRICKLE3O43900 615 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 LCMT2O60294 686 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 OR10H3O60404 316 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SOX30O94993 753 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TBX6O95947 436 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 RPLP0P05388 317 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 CHRM5P08912 532 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 INHBBP09529 407 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 NR2F6P10588 404 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 CD36P16671 472 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TNFRSF1BP20333 461 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 HNRNPA2B1P22626 353 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MAP2K4P45985 399 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 BMXP51813 675 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MAPK10P53779 464 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 CASP9P55211 416 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 HYAL1Q12794 435 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ADAM15Q13444 863 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 NR1D2Q14995 579 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SPCS2Q15005 226 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PTGES3Q15185 160 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TIGD6Q17RP2 521 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PRSS53Q2L4Q9 553 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TMEM44Q2T9K0 475 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 C2orf27AQ580R0 203 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TMEM196Q5HYL7 178 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MANEAQ5SRI9 462 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 C9orf50Q5SZB4 431 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SLX4IPQ5VYV7 408 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 FAM109BQ6ICB4 259 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MRM1Q6IN84 353 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ZNF425Q6IV72 752 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TUBA3EQ6PEY2 450 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 DEF8Q6ZN54 512 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ASPGQ86U10 573 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TMCO5AQ8N6Q1 288 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 OR8J1Q8NGP2 316 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 OR9Q1Q8NGQ5 310 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 APH1BQ8WW43 257 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 DNASE1L2Q92874 299 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 KLK6Q92876 244 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 GTPBP3Q969Y2 492 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ZHX1-C8orf76Q96EF9 292 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MSANTD3Q96H12 275 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 COX4I2Q96KJ9 171 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SIGLEC11Q96RL6 698 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SERINC2Q96SA4 455 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TREX2Q9BQ50 279 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 CDCA4Q9BXL8 241 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 POLR2J3Q9H1A7 115 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 MMP27Q9H306 513 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 GLIPR2Q9H4G4 154 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 XKR8Q9H6D3 395 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 EVA1AQ9H8M9 152 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SLC6A20Q9NP91 592 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 SLAMF7Q9NQ25 335 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PRDM7Q9NQW5 492 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 TEX10Q9NXF1 929 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ACAD8Q9UKU7 415 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 KLHL20Q9Y2M5 609 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 RPL36Q9Y3U8 105 aaKnown RBP8.46□□□□□ -1.06
TMEM116-209ENST00000550020 ASB4Q9Y574 426 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 DOCK6Q96HP0 2047 aa8.46□□□□□ -1.06
TMEM116-209ENST00000550020 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 OR5K4A6NMS3 321 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 EFCAB9A8MZ26 197 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 TLR4O00206 839 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 HAT1O14929 419 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 SLC31A1O15431 190 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 AIREO43918 545 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ERAL1O75616 437 aaKnown RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 NADKO95544 446 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ZBTB11O95625 1053 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-209ENST00000550020 VIPP01282 170 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 GASTP01350 101 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 ASGR2P07307 311 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 IFI6P09912 130 aa8.45□□□□□ -1.06
TMEM116-209ENST00000550020 OR12D1P0DN82 309 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms