RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 NTN1O95631 604 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TSPAN19P0C672 248 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 IL7P13232 177 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 LAG3P18627 525 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 GINS1Q14691 196 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SNAPC1Q16533 368 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TRIM69Q86WT6 500 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 AMER3Q8N944 861 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 OTULINQ96BN8 352 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TMCO6Q96DC7 493 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PDXPQ96GD0 296 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 MRGPRX3Q96LB0 322 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SGPP1Q9BX95 441 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 OBSL1O75147 1896 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 FAM47E-STBD1D6RA91 191 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 CH25HO95992 272 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 CXCL10P02778 98 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 CRYBB2P43320 205 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 CCT3P49368 545 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 MAP4K2Q12851 820 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PGBD2Q6P3X8 592 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 COMTD1Q86VU5 262 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 C17orf64Q86WR6 236 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZNF547Q8IVP9 402 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 KRT78Q8N1N4 520 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZSWIM3Q96MP5 696 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TREX2Q9BQ50 279 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 FNDC11Q9BVV2 318 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TAPBPLQ9BX59 468 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 RACGAP1Q9H0H5 632 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 KNL1Q8NG31 2342 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 A0A1W2PQL4 384 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 WASH3PC4AMC7 463 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SCAMP1O15126 338 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PI15O43692 258 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SRPRAP08240 638 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 TCEA2Q15560 299 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZNF79Q15937 498 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 FAM214AQ32MH5 1076 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PYDC2Q56P42 97 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PDZK1Q5T2W1 519 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PLPP4Q5VZY2 271 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PODNL1Q6PEZ8 512 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 OR8J1Q8NGP2 316 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 OR6F1Q8NGZ6 308 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SLC9A6Q92581 669 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 NUS1Q96E22 293 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 DTD2Q96FN9 168 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 PLSCR3Q9NRY6 295 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 AHSPQ9NZD4 102 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 SEC14L4Q9UDX3 406 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 STUB1Q9UNE7 303 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
RAPGEF3-219ENST00000549151 CENPXA8MT69 81 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 HMGN4O00479 90 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 OR1F1O43749 312 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 DDCP20711 480 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 S100A1P23297 94 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 SDC2P34741 201 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ETV5P41161 510 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 RFX2P48378 723 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ETV1P50549 477 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 LIMK1P53667 647 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 UBE3AQ05086 875 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 DBPQ10586 325 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ILKQ13418 452 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 NANOGNBQ7Z5D8 188 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 MMAAQ8IVH4 418 aaKnown RBP11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 PHC2Q8IXK0 858 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ANKRD53Q8N9V6 530 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 TM4SF18Q96CE8 201 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 SLC25A19Q9HC21 320 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ZCCHC3Q9NUD5 404 aaKnown RBP11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 MGAT4BQ9UQ53 548 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 CMAHPQ9Y471 501 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 NOX1Q9Y5S8 564 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 AP1M2Q9Y6Q5 423 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 V9GYH0 126 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 ANTXRLA6NF34 631 aa11.3□□□□□ -0.6
RAPGEF3-219ENST00000549151 HIDE1A8MVS5 230 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms