RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 IDSP22304 550 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SLC15A1P46059 708 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 PRLHRP49683 370 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 TBPL1P62380 186 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 HBA1P69905 142 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 KCNJ10P78508 379 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SMAD2Q15796 467 aaKnown RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 MPEG1Q2M385 716 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 CPTPQ5TA50 214 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SYNPOQ8N3V7 929 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 DTX3Q8N9I9 347 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 OR8J2Q8NGG1 315 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 RPLP0P6Q8NHW5 317 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 KCNC2Q96PR1 638 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 CCDC32Q9BV29 185 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 CHST8Q9H2A9 424 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 CCDC59Q9P031 241 aaKnown RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 PCDHB11Q9Y5F2 797 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 GMPPBQ9Y5P6 360 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ARPC4-TTLL3A0A0A6YYG9 625 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 J3KTA2 159 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 DSCR3O14972 297 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 PCDHGA12O60330 932 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 KLHL18O94889 574 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 DNTTP04053 509 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ZNF8P17098 575 aaPredicted RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 KRT20P35900 424 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SRSF11Q05519 484 aaKnown RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 COL9A2Q14055 689 aaPredicted RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 WSCD2Q2TBF2 565 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ESCO2Q56NI9 601 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SPANXN2Q5MJ10 180 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 GRHL2Q6ISB3 625 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 CBLL1Q75N03 491 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 FAM124AQ86V42 546 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 NLRP8Q86W28 1048 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 SETD6Q8TBK2 473 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 HLA-CQ95604 372 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 MARVELD3Q96A59 401 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 C7orf34Q96L11 122 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ACAT2Q9BWD1 397 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ITPAQ9BY32 194 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 NARFLQ9H6Q4 476 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 DCAF16Q9NXF7 216 aa14.25□□□□□ -0.13
CHFR-223ENST00000544268 ZFR2Q9UPR6 939 aaKnown RBP14.25□□□□□ -0.13
CHFR-223ENST00000544268 OR5K3A6NET4 321 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 SLC16A5O15375 505 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 ATG13O75143 517 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 PCCBP05166 539 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 CFL1P23528 166 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 CRATP43155 626 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 MRPS21P82921 87 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 CSTF3Q12996 717 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 FGL2Q14314 439 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 RGNQ15493 299 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 SLCO4C1Q6ZQN7 724 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 NRARPQ7Z6K4 114 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 ZNF540Q8NDQ6 660 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 OR4A15Q8NGL6 344 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 OR14C36Q8NHC7 312 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 KLK6Q92876 244 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 SNAPC3Q92966 411 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 TMCO6Q96DC7 493 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 APOL4Q9BPW4 351 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 KRT84Q9NSB2 600 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 KIF17Q9P2E2 1029 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 RUVBL1Q9Y265 456 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 CCDC88CQ9P219 2028 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 H0YIV9 168 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 QSOX1O00391 747 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 CTDSP2O14595 271 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 KPNA5O15131 536 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 WBP4O75554 376 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 UGT2B17O75795 530 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 C6orf47O95873 294 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 LCKP06239 509 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 NPPBP16860 134 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 DNAJA1P31689 397 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 MVDP53602 400 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 UGT2B15P54855 530 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 NDUFAF5Q5TEU4 345 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 TMEM92Q6UXU6 159 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 EIF3MQ7L2H7 374 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 TRMT11Q7Z4G4 463 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 APH1BQ8WW43 257 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 FAM3CQ92520 227 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 OMA1Q96E52 524 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 CCM2Q9BSQ5 444 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 NUP50Q9UKX7 468 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 TBC1D24Q9ULP9 559 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 PCDHGB2Q9Y5G2 931 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 CFAP20Q9Y6A4 193 aaKnown RBP14.24□□□□□ -0.13
CHFR-223ENST00000544268 PLXND1Q9Y4D7 1925 aa14.24□□□□□ -0.13
CHFR-223ENST00000544268 MEIOCA2RUB1 952 aa14.23□□□□□ -0.13
CHFR-223ENST00000544268 MGAT4DA6NG13 374 aa14.23□□□□□ -0.13
CHFR-223ENST00000544268 LILRB5O75023 590 aa14.23□□□□□ -0.13
CHFR-223ENST00000544268 ZNF780AO75290 641 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms