RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SDC3O75056 442 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 HNRNPA2B1P22626 353 aaKnown RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 LHCGRP22888 699 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 GSTM2P28161 218 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 UGT2B10P36537 528 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 NR0B1P51843 470 aaKnown RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 ACY1Q03154 408 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 CRYZQ08257 329 aaKnown RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 TMEM25Q86YD3 366 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 ARHGAP12Q8IWW6 846 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 SRA1Q9HD15 236 aaKnown RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 NUFIP1Q9UHK0 495 aaKnown RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 CD70P32970 193 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 BNIP3Q12983 259 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 TCEAL1Q15170 157 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 PPP1R3AQ16821 1122 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF404Q494X3 552 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 GRHL2Q6ISB3 625 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.164e-11■■□□□ 14
SCARB1-205ENST00000538291 ASB15Q8WXK1 588 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 SLC30A2Q9BRI3 323 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF701Q9NV72 531 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF451Q9Y4E5 1061 aa16.08■□□□□ 0.16
SCARB1-205ENST00000538291 MYADML2A6NDP7 307 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 OR6C70A6NIJ9 312 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 SMAD9O15198 467 aaKnown RBP16.07■□□□□ 0.16
SCARB1-205ENST00000538291 ATE1O95260 518 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 MT-ND2P03891 347 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 CA3P07451 260 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 RNF144AP50876 292 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-205ENST00000538291 TUBA1CQ9BQE3 449 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 PTBP2Q9UKA9 531 aaKnown RBP16.07■□□□□ 0.16
SCARB1-205ENST00000538291 PCDHGA6Q9Y5G7 932 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 SOCS2O14508 198 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 ABCB7O75027 752 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 PROS1P07225 676 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 CELP19835 753 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 GCGRP47871 477 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 POU4F2Q12837 409 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 ABHD17BQ5VST6 288 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 RAB12Q6IQ22 244 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 OR8K5Q8NH50 307 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 RADILQ96JH8 1075 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 hCG_1807616A0A1W2PRN6 198 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 GXYLT2A0PJZ3 443 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 SCGB2A1O75556 95 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 DRD1P21728 446 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 NAA10P41227 235 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-205ENST00000538291 MAN2A2P49641 1150 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 LRFN4Q6PJG9 635 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 TIGD4Q8IY51 512 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 HORMAD2Q8N7B1 307 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 TM9SF4Q92544 642 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 NANSQ9NR45 359 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 ZDHHC7Q9NXF8 308 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 SLC19A2O60779 497 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 RFPL1O75677 317 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 CYBAP13498 195 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF773Q6PK81 442 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 RELL1Q8IUW5 271 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 SLC37A3Q8NCC5 494 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 OR8S1Q8NH09 359 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 HUS1BQ8NHY5 278 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 FCAMRQ8WWV6 532 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 TRIM43Q96BQ3 446 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-205ENST00000538291 FBXL20Q96IG2 436 aa16.07■□□□□ 0.16
SCARB1-205ENST00000538291 CPNE6O95741 557 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 SHC2P98077 582 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 PLEKHN1Q494U1 663 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 UNC50Q53HI1 259 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 LARP4Q71RC2 724 aaKnown RBP eCLIP16.06■□□□□ 0.161e-12■□□□□ 9
SCARB1-205ENST00000538291 DNAJA3Q96EY1 480 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 MSLNLQ96KJ4 702 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 HOXD1Q9GZZ0 328 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 TREM1Q9NP99 234 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 AFDNP55196 1824 aaKnown RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 IL1RNP18510 177 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 FRKP42685 505 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 SOX9P48436 509 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 HK3P52790 923 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 EXOC3L2Q2M3D2 409 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 CDKL4Q5MAI5 379 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 FIGNL1Q6PIW4 674 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 KLHDC8AQ8IYD2 350 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF559Q9BR84 538 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 DKK3Q9UBP4 350 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 GJE1A6NN92 205 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 DLGAP1O14490 977 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 BPIP17213 487 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 THBS2P35442 1172 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 VEGFBP49765 207 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 TAS2R38P59533 333 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 FAM76BQ5HYJ3 339 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 MANEALQ5VSG8 457 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 ARHGAP11AQ6P4F7 1023 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF517Q6ZMY9 492 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-205ENST00000538291 ZNF584Q8IVC4 421 aa16.06■□□□□ 0.16
SCARB1-205ENST00000538291 POGLUT1Q8NBL1 392 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms