RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 MRPS7Q9Y2R9 242 aaKnown RBP2.85□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SELENOKQ9Y6D0 94 aa2.85□□□□□ -1.95
SCARNA15.2-201ENST00000516409 STK36Q9NRP7 1315 aa2.85□□□□□ -1.95
SCARNA15.2-201ENST00000516409 PARD3Q8TEW0 1356 aa2.85□□□□□ -1.95
SCARNA15.2-201ENST00000516409 hCG_38984A0A1B0GV85 526 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 A0A1W2PR80 420 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GSAPA4D1B5 854 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NKX6-3A6NJ46 265 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZSCAN5BA6NJL1 495 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CCDC169A6NNP5 214 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 A8MU76 341 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 DCXO43602 365 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NUDT21O43809 227 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NEBLO76041 1014 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 STK17BO94768 372 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 UFL1O94874 794 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NDUFA7O95182 113 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 FGF19O95750 216 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ANGPTL1O95841 491 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CSF2P04141 144 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ALPLP05186 524 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RPLP0P05388 317 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 F7P08709 466 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MBL2P11226 248 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 C4BPBP20851 252 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GIFP27352 417 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GDI1P31150 447 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CYLC1P35663 651 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ID1P41134 155 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MATKP42679 507 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RGS4P49798 205 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SGSHP51688 502 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NAPAP54920 295 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RAG2P55895 527 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RPL27P61353 136 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MRPS21P82921 87 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZMYND11Q15326 602 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CAMK4Q16566 473 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SHROOM1Q2M3G4 852 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZNF699Q32M78 642 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 KCTD21Q4G0X4 260 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZNF311Q5JNZ3 666 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 TCHHL1Q5QJ38 904 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SPATA46Q5T0L3 261 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 AWAT2Q6E213 333 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 NEPROQ6NW34 567 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZNF790Q6PG37 636 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 BLOC1S2Q6QNY1 142 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZYG11AQ6WRX3 759 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 C9orf139Q6ZV77 190 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 C1QL2Q7Z5L3 287 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RBM23Q86U06 439 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GPBP1Q86WP2 473 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 FAM131BQ86XD5 332 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZNF575Q86XF7 245 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CBWD2Q8IUF1 395 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CDH26Q8IXH8 852 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 EFCAB13Q8IY85 973 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 LINC00518Q8N0U6 118 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MARVELD2Q8N4S9 558 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CNBD1Q8NA66 436 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 TMEM178AQ8NBL3 297 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 C8orf46Q8TAG6 207 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 LMO3Q8TAP4 145 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GOLGA5Q8TBA6 731 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SMAP2Q8WU79 429 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GATAD1Q8WUU5 269 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 LIPHQ8WWY8 451 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZNF486Q96H40 463 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 VSTM2LQ96N03 204 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 DUX5Q96PT3 197 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SECISBP2Q96T21 854 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 ZPBPQ9BS86 351 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 DCTN5Q9BTE1 182 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 RBM24Q9BX46 236 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 GCOM2Q9BZD3 368 aaPredicted RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 LRRC40Q9H9A6 602 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 COG4Q9H9E3 785 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 AGPAT5Q9NUQ2 364 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 CTNNA3Q9UI47 895 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MRPS33Q9Y291 106 aaKnown RBP2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 MAB21L2Q9Y586 359 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 PCDHGB1Q9Y5G3 927 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 SMCHD1A6NHR9 2005 aa2.84□□□□□ -1.95
SCARNA15.2-201ENST00000516409 PTPRUQ92729 1446 aa2.84□□□□□ -1.96
SCARNA15.2-201ENST00000516409 KIAA1210Q9ULL0 1709 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 LOC390937A0A1W2PQ73 354 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 OR5H15A6NDH6 313 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 MSGN1A6NI15 193 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 LRRC30A6NM36 301 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 MEI4A8MW99 385 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 TCP10L2B9ZVM9 353 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 NPIPA2E9PIF3 369 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 E9PMD0 336 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 H0YL77 283 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 SGK494L7N484 410 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 BUB1O43683 1085 aa2.83□□□□□ -1.96
SCARNA15.2-201ENST00000516409 TSC22D2O75157 780 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms