RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 CCDC12Q8WUD4 166 aaPredicted RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 PDCD6IPQ8WUM4 868 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 SSMEM1Q8WWF3 244 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 SLC13A3Q8WWT9 602 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 NT5C3BQ969T7 300 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 MRPL38Q96DV4 380 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 FAM122AQ96E09 287 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 NSMCE2Q96MF7 247 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 ANKRD27Q96NW4 1050 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 DUX3Q96PT4 197 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 VPS35Q96QK1 796 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 CYTH2Q99418 400 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 SEPHS2Q99611 448 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 RAD9AQ99638 391 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 NUP58Q9BVL2 599 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 TBC1D10AQ9BXI6 508 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 TDRD1Q9BXT4 1180 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 PARD6GQ9BYG4 376 aaPredicted RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 POLR1EQ9GZS1 481 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 C6orf62Q9GZU0 229 aaPredicted RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 MIS12Q9H081 205 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 OR51B5Q9H339 312 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 COPS7BQ9H9Q2 264 aaPredicted RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 MRPL47Q9HD33 250 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 VCX3AQ9NNX9 186 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 TREM1Q9NP99 234 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 IL26Q9NPH9 171 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 ZNF275Q9NSD4 429 aaPredicted RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 SAMSN1Q9NSI8 373 aaKnown RBP2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 ZDHHC18Q9NUE0 388 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 RMND1Q9NWS8 449 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 TMOD2Q9NZR1 351 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 VPS54Q9P1Q0 977 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 SPATA2Q9UM82 520 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 PADI2Q9Y2J8 665 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 CCL27Q9Y4X3 112 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 LRRC42Q9Y546 428 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 ABCA10Q8WWZ4 1543 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 KIF15Q9NS87 1388 aa2.96□□□□□ -1.94
AC004053.1-201ENST00000515127 GRIN2DO15399 1336 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PCDH11XQ9BZA7 1347 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CPSF1Q10570 1443 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 MEX3AA1L020 520 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 A4D1N5 150 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 RAB19A4D1S5 217 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 MTMR11A4FU01 709 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PGRMC1O00264 195 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 DNM1LO00429 736 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 ZNF197O14709 1029 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 MEIS2O14770 477 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 OGTO15294 1046 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 EDIL3O43854 480 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 GMNNO75496 209 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PRKRAO75569 313 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CDK14O94921 469 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 SLCO2B1O94956 709 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PTBP3O95758 552 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CSTAP01040 98 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 RPS17P08708 135 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 IGHV4-31P0DP07 118 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 HAPLN1P10915 354 aaPredicted RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 GNSP15586 552 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 TYMPP19971 482 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CA6P23280 308 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 AHCYP23526 432 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CPT2P23786 658 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CMA1P23946 247 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PDHA2P29803 388 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 GNA11P29992 359 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PPP2R1AP30153 589 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 MAT2AP31153 395 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PTGER4P35408 488 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 NUP62P37198 522 aaPredicted RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 KIR3DL2P43630 455 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 KRT6CP48668 564 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 SLC26A2P50443 739 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 ZNF75DP51815 510 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 ATXN3P54252 364 aaPredicted RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CDH11P55287 796 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CLDN15P56746 228 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 STX17P56962 302 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 RELAQ04206 551 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 YWHAHQ04917 246 aaPredicted RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 IFFO1Q0D2I5 559 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CALCOCO2Q13137 446 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 RPA4Q13156 261 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 GPR17Q13304 367 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PPIL2Q13356 520 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PMS2P3Q13401 168 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PPIGQ13427 754 aaKnown RBP eCLIP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 RCN2Q14257 317 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 FASTKD3Q14CZ7 662 aaKnown RBP2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CYTH1Q15438 398 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 MCMDC2Q4G0Z9 681 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CCDC58Q4VC31 144 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 ZCWPW2Q504Y3 356 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 PHLDA2Q53GA4 152 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 TCP11X2Q5H9J9 407 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 CDKL4Q5MAI5 379 aa2.95□□□□□ -1.94
AC004053.1-201ENST00000515127 C10orf120Q5SQS8 335 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms