RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 C3orf18Q9UK00 162 aa12.71□□□□□ -0.37
APTX-231ENST00000494973 FARSAQ9Y285 508 aaKnown RBP12.71□□□□□ -0.37
APTX-231ENST00000494973 MSRB2Q9Y3D2 182 aa12.71□□□□□ -0.37
APTX-231ENST00000494973 PCDHGA6Q9Y5G7 932 aa12.71□□□□□ -0.37
APTX-231ENST00000494973 C9JVG2 144 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 LDB3O75112 727 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 DNAJB6O75190 326 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 COQ9O75208 318 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 UNC5CO95185 931 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 IFNA16P05015 189 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 NT5EP21589 574 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 NUDT2P50583 147 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 WNT3P56703 355 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 BNIP1Q12981 228 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 TLR1Q15399 786 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 SPRED3Q2MJR0 410 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 TBC1D25Q3MII6 688 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 LRIF1Q5T3J3 769 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 RAB43Q86YS6 212 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 GALNT12Q8IXK2 581 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 POU5F2Q8N7G0 328 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 ENDOVQ8N8Q3 282 aaKnown RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 TMEM52Q8NDY8 209 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 OR56A1Q8NGH5 318 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 OR14A16Q8NHC5 309 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 GTF2H4Q92759 462 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 RCN3Q96D15 328 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 IP6K3Q96PC2 410 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 HOPXQ9BPY8 73 aaPredicted RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 C1orf21Q9H246 121 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 GLIPR2Q9H4G4 154 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 SOX17Q9H6I2 414 aaPredicted RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 SLC52A3Q9NQ40 469 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 ARL8BQ9NVJ2 186 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 CROTQ9UKG9 612 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
APTX-231ENST00000494973 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 SDK2Q58EX2 2172 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 DMXL1Q9Y485 3027 aa12.7□□□□□ -0.38
APTX-231ENST00000494973 A0A087WV62 115 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 TRABD2BA6NFA1 517 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 PLOD2O00469 737 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 AIM2O14862 343 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 SCN2BO60939 215 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 JRKO75564 520 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 SOX30O94993 753 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 CBX6O95503 412 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 KRT75O95678 551 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 C6orf47O95873 294 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 RECKO95980 971 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 TNNI3P19429 210 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 MAOAP21397 527 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 UQCRC2P22695 453 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 PTPN4P29074 926 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 DLSTP36957 453 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 AP2B1P63010 937 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 HSPB3Q12988 150 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 SLC2A7Q6PXP3 512 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 TIPARPQ7Z3E1 657 aaKnown RBP12.69□□□□□ -0.38
APTX-231ENST00000494973 DTX1Q86Y01 620 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 RIT1Q92963 219 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 NKD1Q969G9 470 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 GPN2Q9H9Y4 310 aaPredicted RBP12.69□□□□□ -0.38
APTX-231ENST00000494973 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
APTX-231ENST00000494973 KLK13Q9UKR3 277 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 TCFL5Q9UL49 500 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
APTX-231ENST00000494973 AHCTF1Q8WYP5 2266 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 LOC102723996A0A087X1L8 192 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 TTC36A6NLP5 189 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 EVPLLA8MZ36 301 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 FBP2O00757 339 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 PLOD3O60568 738 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 DNAJA2O60884 412 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
APTX-231ENST00000494973 MMP11P24347 488 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 SOAT1P35610 550 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 OR4D2P58180 307 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 HBA1P69905 142 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 PSPHP78330 225 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 PHC1P78364 1004 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 BTG2P78543 158 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 MAP4K2Q12851 820 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 ERV3-1Q14264 604 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 SSPNQ14714 243 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 MPEG1Q2M385 716 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 SPATS1Q496A3 300 aa12.68□□□□□ -0.38
APTX-231ENST00000494973 FAM199XQ6PEV8 388 aaPredicted RBP12.68□□□□□ -0.38
APTX-231ENST00000494973 TMEM205Q6UW68 189 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms